RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 TUBA4AP68366 448 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 PRR5P85299 388 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 CDK6Q00534 326 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 MC1RQ01726 317 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 HYAL2Q12891 473 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 FZD5Q13467 585 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 GAB1Q13480 694 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 SCARB2Q14108 478 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 GPR18Q14330 331 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 CEBPEQ15744 281 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 CCDC85BQ15834 202 aaPredicted RBP7.53□□□□□ -1.2
VMA21-203ENST00000477649 MPEG1Q2M385 716 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 SLC36A3Q495N2 470 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 SPDYE7PQ495Y7 208 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 KCTD21Q4G0X4 260 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 LRRC23Q53EV4 343 aaPredicted RBP7.53□□□□□ -1.2
VMA21-203ENST00000477649 IFI44LQ53G44 452 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 TPRG1LQ5T0D9 272 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 OR2T5Q6IEZ7 315 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 REEP3Q6NUK4 255 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 SLC48A1Q6P1K1 146 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 SHQ1Q6PI26 577 aaKnown RBP7.53□□□□□ -1.2
VMA21-203ENST00000477649 ENPP6Q6UWR7 440 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 RNF44Q7L0R7 432 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 ZNF551Q7Z340 670 aaPredicted RBP7.53□□□□□ -1.2
VMA21-203ENST00000477649 ARMC8Q8IUR7 673 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 EPHX4Q8IUS5 362 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 NAGSQ8N159 534 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 FBXL6Q8N531 539 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 FLCNQ8NFG4 579 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 PJA1Q8NG27 643 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 OR56A1Q8NGH5 318 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 OR2T29Q8NH02 315 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 FLVCR1-AS1Q8TAF5 88 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 BAHD1Q8TBE0 780 aaPredicted RBP7.53□□□□□ -1.2
VMA21-203ENST00000477649 MIPOL1Q8TD10 442 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 ADAMTS18Q8TE60 1221 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 TMBIM1Q969X1 311 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 FKBP10Q96AY3 582 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 SMIM10Q96HG1 83 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 CNBD2Q96M20 576 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 TRAPPC9Q96Q05 1148 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 TEFMQ96QE5 360 aaKnown RBP7.53□□□□□ -1.2
VMA21-203ENST00000477649 OR2A5Q96R48 311 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 BBS4Q96RK4 519 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 CDX2Q99626 313 aaPredicted RBP7.53□□□□□ -1.2
VMA21-203ENST00000477649 EPYCQ99645 322 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 C17orf62Q9BQA9 187 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 ORAI3Q9BRQ5 295 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 NPLQ9BXD5 320 aaPredicted RBP7.53□□□□□ -1.2
VMA21-203ENST00000477649 MRPS26Q9BYN8 205 aaKnown RBP7.53□□□□□ -1.2
VMA21-203ENST00000477649 SEMA6CQ9H3T2 930 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 NTN4Q9HB63 628 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 C3orf14Q9HBI5 128 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 CD93Q9NPY3 652 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 THSD1Q9NS62 852 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 TUBA8Q9NY65 449 aaPredicted RBP7.53□□□□□ -1.2
VMA21-203ENST00000477649 CALML5Q9NZT1 146 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 EPHA6Q9UF33 1036 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 ENOPH1Q9UHY7 261 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 PILRAQ9UKJ1 303 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 UTS2RQ9UKP6 389 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 CA5BQ9Y2D0 317 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 MYRFQ9Y2G1 1151 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 PCDHGB3Q9Y5G1 929 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 SLC22A7Q9Y694 548 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 ZNF780BQ9Y6R6 833 aa7.53□□□□□ -1.2
VMA21-203ENST00000477649 PCM1Q15154 2024 aa7.52□□□□□ -1.2
VMA21-203ENST00000477649 SMIM31A0A1B0GVY4 71 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 GSAPA4D1B5 854 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 FAM149AA5PLN7 773 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 OR6C74A6NCV1 312 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 MYO1GB0I1T2 1018 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 C5orf58C9J3I9 102 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 RTCAO00442 366 aaKnown RBP7.52□□□□□ -1.21
VMA21-203ENST00000477649 PROM1O43490 865 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 ASNA1O43681 348 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 B3GALT2O43825 422 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 SH3BP5O60239 455 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 SRPX2O60687 465 aaPredicted RBP7.52□□□□□ -1.21
VMA21-203ENST00000477649 SERPINB7O75635 380 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 H6PDO95479 791 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 EML2O95834 649 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 GBAP04062 536 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 NTRK1P04629 796 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 FHP07954 510 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 UBTFL6P0CB48 400 aaPredicted RBP7.52□□□□□ -1.21
VMA21-203ENST00000477649 NR2F6P10588 404 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 THRBP10828 461 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 DCTP40126 519 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 RPL5P46777 297 aaKnown RBP7.52□□□□□ -1.21
VMA21-203ENST00000477649 CCT3P49368 545 aaKnown RBP7.52□□□□□ -1.21
VMA21-203ENST00000477649 KHKP50053 298 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 EPHA4P54764 986 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 PCBP3P57721 371 aaKnown RBP7.52□□□□□ -1.21
VMA21-203ENST00000477649 PPP2R2BQ00005 443 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 HHEXQ03014 270 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 EEF1A2Q05639 463 aaKnown RBP7.52□□□□□ -1.21
VMA21-203ENST00000477649 SLC14A1Q13336 389 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 TP53BP2Q13625 1128 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms