RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 SERPING1P05155 500 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 PAEPP09466 180 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 VDRP11473 427 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 MYOGP15173 224 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 BDNFP23560 247 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 ADORA2BP29275 332 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 CYLC1P35663 651 aaPredicted RBP3.58□□□□□ -1.84
UBR3-209ENST00000477461 NDST1P52848 882 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 ARPP19P56211 112 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 SLC8A3P57103 927 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 YWHAHQ04917 246 aaPredicted RBP3.58□□□□□ -1.84
UBR3-209ENST00000477461 KLHL30Q0D2K2 578 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 INCA1Q0VD86 236 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 PNRC1Q12796 327 aaPredicted RBP3.58□□□□□ -1.84
UBR3-209ENST00000477461 GPM6BQ13491 265 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 TUBB2AQ13885 445 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 SMC1AQ14683 1233 aaKnown RBP3.58□□□□□ -1.84
UBR3-209ENST00000477461 PSMD5Q16401 504 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 GRTP1Q5TC63 336 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 TMCO3Q6UWJ1 677 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 CCDC186Q7Z3E2 898 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 ACOT1Q86TX2 421 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 ZNF677Q86XU0 584 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 LINC00346Q8IVM7 164 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 FAM71AQ8IYT1 594 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 PDCL2Q8N4E4 241 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 MSANTD4Q8NCY6 345 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 GRHL3Q8TE85 626 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 SHC3Q92529 594 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 SYN2Q92777 582 aaPredicted RBP3.58□□□□□ -1.84
UBR3-209ENST00000477461 TMCO6Q96DC7 493 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 TRIM44Q96DX7 344 aaPredicted RBP3.58□□□□□ -1.84
UBR3-209ENST00000477461 C18orf12Q96KH6 178 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 ZNF582Q96NG8 517 aaPredicted RBP3.58□□□□□ -1.84
UBR3-209ENST00000477461 PANX2Q96RD6 677 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 SYT15Q9BQS2 421 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 BTBD10Q9BSF8 475 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 TUBB2BQ9BVA1 445 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 SDCBP2Q9H190 292 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 PELI2Q9HAT8 420 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 MBNL1Q9NR56 388 aaKnown RBP3.58□□□□□ -1.84
UBR3-209ENST00000477461 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.58□□□□□ -1.84
UBR3-209ENST00000477461 MRPL17Q9NRX2 175 aaKnown RBP3.58□□□□□ -1.84
UBR3-209ENST00000477461 MARCH5Q9NX47 278 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 NPAP1Q9NZP6 1156 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 IL17BQ9UHF5 180 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 RPS6KA6Q9UK32 745 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 CDH9Q9ULB4 789 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 KIAA1257Q9ULG3 409 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 GRIP1Q9Y3R0 1128 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 BZW2Q9Y6E2 419 aaKnown RBP3.58□□□□□ -1.84
UBR3-209ENST00000477461 COL4A6Q14031 1691 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 TSC2P49815 1807 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 PLXNA4Q9HCM2 1894 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 CEP290O15078 2479 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 TCRBV21S2A2A0A5A6 115 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 SYNDIG1LA6NDD5 238 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 C5orf67F2Z3F1 127 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 M0QYV0 167 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 CXCL14O95715 111 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 HMBSP08397 361 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 FAM200BP0CF97 657 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 PNMA6AP0CW24 399 aaPredicted RBP3.57□□□□□ -1.84
UBR3-209ENST00000477461 SKILP12757 684 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 CCDC130P13994 396 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 CYP11B1P15538 503 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 ACAT1P24752 427 aaKnown RBP3.57□□□□□ -1.84
UBR3-209ENST00000477461 LMO2P25791 158 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 ANXA13P27216 316 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 SLC6A6P31641 620 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 OR1D2P34982 312 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 PRKCIP41743 596 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 LMAN1P49257 510 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 KCNJ10P78508 379 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 CDR2Q01850 454 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 SMARCB1Q12824 385 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 SPA17Q15506 151 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 GOLGA7BQ2TAP0 167 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 GTDC1Q4AE62 458 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 SLC39A12Q504Y0 691 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 MDH1BQ5I0G3 518 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 TAF3Q5VWG9 929 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 PLPP4Q5VZY2 271 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 ALS2CLQ60I27 953 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 PPP1R2P3Q6NXS1 205 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 PRSS55Q6UWB4 352 aaPredicted RBP3.57□□□□□ -1.84
UBR3-209ENST00000477461 CD300LGQ6UXG3 332 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 DENND5BQ6ZUT9 1274 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 KRT74Q7RTS7 529 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 SLC47A2Q86VL8 602 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 TMEM173Q86WV6 379 aaPredicted RBP3.57□□□□□ -1.84
UBR3-209ENST00000477461 PLD3Q8IV08 490 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 GPR65Q8IYL9 337 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 CRYBG2Q8N1P7 616 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 CPSF7Q8N684 471 aaKnown RBP3.57□□□□□ -1.84
UBR3-209ENST00000477461 TC2NQ8N9U0 490 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 SLC4A11Q8NBS3 891 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 TMEM35BQ8NCS4 154 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 EXD1Q8NHP7 514 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms