RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 EIF3DO15371 548 aaKnown RBP eCLIP3.58□□□□□ -1.84
RPL39-203ENST00000477403 PLRG1O43660 514 aaKnown RBP3.58□□□□□ -1.84
RPL39-203ENST00000477403 VEGFDO43915 354 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 SDC3O75056 442 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 MOCS3O95396 460 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 IL1BP01584 269 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 HLA-DQA2P01906 255 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 CSF2P04141 144 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 HMBSP08397 361 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 CCDC130P13994 396 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 FERP16591 822 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 CCNA2P20248 432 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 ELAVL4P26378 380 aaKnown RBP3.58□□□□□ -1.84
RPL39-203ENST00000477403 PBLDP30039 288 aaPredicted RBP3.58□□□□□ -1.84
RPL39-203ENST00000477403 CASQ1P31415 396 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 CSKP41240 450 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 RABIFP47224 123 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 RASSF2P50749 326 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 NDST1P52848 882 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 CAPZA1P52907 286 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 PNLIPRP2P54317 469 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 ADARP55265 1226 aaKnown RBP3.58□□□□□ -1.84
RPL39-203ENST00000477403 STX17P56962 302 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 SLC8A3P57103 927 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 GNG11P61952 73 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 ECT2LQ008S8 904 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 LTBQ06643 244 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 CYP24A1Q07973 514 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 INCA1Q0VD86 236 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 NPRL3Q12980 569 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 ZNF273Q14593 569 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 IGFBP7Q16270 282 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 ZNF699Q32M78 642 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 KRTAP21-3Q3LHN1 58 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 VWA5B1Q5TIE3 1220 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 ZNF324BQ6AW86 544 aaPredicted RBP3.58□□□□□ -1.84
RPL39-203ENST00000477403 PM20D1Q6GTS8 502 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 AAGABQ6PD74 315 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 TMEM270Q6UE05 265 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 CCBE1Q6UXH8 406 aaPredicted RBP3.58□□□□□ -1.84
RPL39-203ENST00000477403 GLDNQ6ZMI3 551 aaPredicted RBP3.58□□□□□ -1.84
RPL39-203ENST00000477403 MEX3BQ6ZN04 569 aaKnown RBP3.58□□□□□ -1.84
RPL39-203ENST00000477403 GBP6Q6ZN66 633 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 EFL1Q7Z2Z2 1120 aaKnown RBP3.58□□□□□ -1.84
RPL39-203ENST00000477403 SPATA19Q7Z5L4 167 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 ABI3BPQ7Z7G0 1075 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 HOOK3Q86VS8 718 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 CAMK1DQ8IU85 385 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 CCDC65Q8IXS2 484 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 CADM3Q8N126 398 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 STK40Q8N2I9 435 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 AADATQ8N5Z0 425 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 RBMXL3Q8N7X1 1067 aaKnown RBP3.58□□□□□ -1.84
RPL39-203ENST00000477403 C12orf29Q8N999 325 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 LRRC57Q8N9N7 239 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 CAMKVQ8NCB2 501 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 HJURPQ8NCD3 748 aaPredicted RBP3.58□□□□□ -1.84
RPL39-203ENST00000477403 OR6C4Q8NGE1 309 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 RNF139Q8WU17 664 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 NUDCD2Q8WVJ2 157 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 NELFBQ8WX92 580 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 LMLNQ96KR4 655 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 INTS14Q96SY0 518 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 PKP4Q99569 1192 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 IL12RB2Q99665 862 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 WDR77Q9BQA1 342 aaPredicted RBP3.58□□□□□ -1.84
RPL39-203ENST00000477403 HDHD5Q9BXW7 423 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 POLDIP3Q9BY77 421 aaKnown RBP3.58□□□□□ -1.84
RPL39-203ENST00000477403 FRMD8Q9BZ67 464 aaPredicted RBP3.58□□□□□ -1.84
RPL39-203ENST00000477403 TRIM7Q9C029 511 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 CUEDC2Q9H467 287 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 SMYD3Q9H7B4 428 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 MAGEF1Q9HAY2 307 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 PANK4Q9NVE7 773 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 RMND1Q9NWS8 449 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 IL1RAPL1Q9NZN1 696 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 CNIH4Q9P003 139 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 KLQ9UEF7 1012 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 ERVW-1Q9UQF0 538 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 PKP3Q9Y446 797 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 CLDN16Q9Y5I7 305 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 LIPGQ9Y5X9 500 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 U3KQA8 63 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 SETD2Q9BYW2 2564 aaPredicted RBP3.58□□□□□ -1.84
RPL39-203ENST00000477403 UBE4BO95155 1302 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 ITPR3Q14573 2671 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 MUC22E2RYF6 1773 aaPredicted RBP3.58□□□□□ -1.84
RPL39-203ENST00000477403 MYOFQ9NZM1 2061 aa3.58□□□□□ -1.84
RPL39-203ENST00000477403 LRBAP50851 2863 aa3.57□□□□□ -1.84
RPL39-203ENST00000477403 TRBV5-7A0A0A0MS05 114 aa3.57□□□□□ -1.84
RPL39-203ENST00000477403 SPTY2D1-AS1A0A0U1RR47 76 aa3.57□□□□□ -1.84
RPL39-203ENST00000477403 TYW5A2RUC4 315 aaKnown RBP3.57□□□□□ -1.84
RPL39-203ENST00000477403 TMEM110-MUSTN1A8MSY1 372 aa3.57□□□□□ -1.84
RPL39-203ENST00000477403 C17orf100A8MU93 164 aa3.57□□□□□ -1.84
RPL39-203ENST00000477403 EIF3CLB5ME19 914 aaKnown RBP3.57□□□□□ -1.84
RPL39-203ENST00000477403 LMO7DNF2Z398 122 aa3.57□□□□□ -1.84
RPL39-203ENST00000477403 NTN3O00634 580 aaPredicted RBP3.57□□□□□ -1.84
RPL39-203ENST00000477403 MCF2LO15068 1137 aa3.57□□□□□ -1.84
RPL39-203ENST00000477403 SLC31A1O15431 190 aa3.57□□□□□ -1.84
RPL39-203ENST00000477403 AQP9O43315 295 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms