RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 ZDHHC20Q5W0Z9 365 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 KCTD11Q693B1 232 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 TTI2Q6NXR4 508 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 KCTD18Q6PI47 426 aaPredicted RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 TMEM270Q6UE05 265 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 PET117Q6UWS5 81 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 CES3Q6UWW8 571 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 MFSD7Q6UXD7 560 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 VITQ6UXI7 678 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 IDO2Q6ZQW0 420 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 STOX1Q6ZVD7 989 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 C1orf186Q6ZWK4 172 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 CYP4V2Q6ZWL3 525 aaPredicted RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 EFL1Q7Z2Z2 1120 aaKnown RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 ADAMTSL2Q86TH1 951 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 AMZ2Q86W34 360 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 ZFAND4Q86XD8 727 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 PLA2G4DQ86XP0 818 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 C2CD5Q86YS7 1000 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 TICAM1Q8IUC6 712 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 ARMC8Q8IUR7 673 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 GPR65Q8IYL9 337 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 MCOLN2Q8IZK6 566 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 IQCKQ8N0W5 287 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 TAGAPQ8N103 731 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 SNX31Q8N9S9 440 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 AKR7LQ8NHP1 331 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 HMGCLL1Q8TB92 370 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 LKAAEAR1Q8TD35 194 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 KCNE4Q8WWG9 221 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 HTR3CQ8WXA8 447 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 LPGAT1Q92604 370 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 THRSPQ92748 146 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 NTAN1Q96AB6 310 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 ISG20Q96AZ6 181 aaKnown RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 SLC25A36Q96CQ1 311 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 SCRN2Q96FV2 425 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 DUS3LQ96G46 650 aaKnown RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 TPD52L3Q96J77 140 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 ANKRD27Q96NW4 1050 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 QRFPRQ96P65 431 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 RAB3IPQ96QF0 476 aaPredicted RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 TWNKQ96RR1 684 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 RANBP9Q96S59 729 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 ZBTB18Q99592 522 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 NDNQ99608 321 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 KCNS3Q9BQ31 491 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 PSD2Q9BQI7 771 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 CCDC28BQ9BUN5 200 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 TUBB2BQ9BVA1 445 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 APOL6Q9BWW8 343 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 TEX12Q9BXU0 123 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 GLIS2Q9BZE0 524 aaPredicted RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 DERL2Q9GZP9 239 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 BLZF1Q9H2G9 400 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 RIMS4Q9H426 269 aaPredicted RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 ESRP2Q9H6T0 727 aaKnown RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 PALMDQ9NP74 551 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 LZTFL1Q9NQ48 299 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 G6PC2Q9NQR9 355 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 ZNF275Q9NSD4 429 aaPredicted RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 BARHL2Q9NY43 387 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 TAS2R10Q9NYW0 307 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 THEGQ9P2T0 379 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 SPASTQ9UBP0 616 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 PEF1Q9UBV8 284 aaKnown RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 DNPEPQ9ULA0 475 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 SPATA2Q9UM82 520 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 EIF3LQ9Y262 564 aaKnown RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 SLC9A8Q9Y2E8 581 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 ACOT9Q9Y305 439 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 ZNF175Q9Y473 711 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 MAB21L2Q9Y586 359 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 GMPPBQ9Y5P6 360 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 PUS1Q9Y606 427 aaKnown RBP eCLIP2.32□□□□□ -2.04
XRN1-211ENST00000477237 TEX264Q9Y6I9 313 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 TAF1LQ8IZX4 1826 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 PFASO15067 1338 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 GRIN2DO15399 1336 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 PCDH11XQ9BZA7 1347 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 PCDH11YQ9BZA8 1340 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 POLR3AO14802 1390 aaPredicted RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 PLEKHG1Q9ULL1 1385 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 FHOD3Q2V2M9 1422 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 RB1CC1Q8TDY2 1594 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 KIAA1210Q9ULL0 1709 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 TRAV34A0A0B4J273 112 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 A0A0J9YVX5 310 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 SYCE3A1L190 88 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 TRIM49BA6NDI0 452 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 OR5K3A6NET4 321 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 EFCAB10A6NFE3 127 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 DUXAA6NLW8 204 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 GABRR3A8MPY1 467 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 CENPBD1B2RD01 187 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 AIM2O14862 343 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 ALOX15BO15296 676 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 DENRO43583 198 aaKnown RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 SYNGR3O43761 229 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 MAGEC1O60732 1142 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms