RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 CLK4Q9HAZ1 481 aaKnown RBP11.63□□□□□ -0.55
APTX-220ENST00000476858 ADGRE2Q9UHX3 823 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 NTNG1Q9Y2I2 539 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 FIS1Q9Y3D6 152 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 TENM4Q6N022 2769 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 CPAMD8Q8IZJ3 1885 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 SAGE2PA6NJ88 616 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 A8MUI8 341 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 ITM2AO43736 263 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 CTNSO60931 367 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 LYPLA1O75608 230 aaPredicted RBP11.62□□□□□ -0.55
APTX-220ENST00000476858 WISP2O76076 250 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 MYO1DO94832 1006 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 SORBS2O94875 1100 aaKnown RBP11.62□□□□□ -0.55
APTX-220ENST00000476858 BPGMP07738 259 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 SFTPCP11686 197 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 HMOX2P30519 316 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 GPR143P51810 404 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 PKNOX1P55347 436 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 HSD17B7P56937 341 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 SKP1P63208 163 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 FOLH1Q04609 750 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 BTKQ06187 659 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 TGM3Q08188 693 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 KLRB1Q12918 225 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 NIPAL1Q6NVV3 410 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 CRLF3Q8IUI8 442 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 ZNF595Q8IYB9 648 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 APCDD1LQ8NCL9 501 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 MYRIPQ8NFW9 859 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 OR6Y1Q8NGX8 325 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 OR2T11Q8NH01 316 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 AGR3Q8TD06 166 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 ELP5Q8TE02 316 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 CHTF18Q8WVB6 975 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 C19orf60Q96EN9 201 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 SMC6Q96SB8 1091 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 ALOXE3Q9BYJ1 711 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 SLC29A3Q9BZD2 475 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 C20orf27Q9GZN8 174 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 ANKRD10Q9NXR5 420 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 PSD3Q9NYI0 1048 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 HEY2Q9UBP5 337 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 GIMAP2Q9UG22 337 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 PPT2Q9UMR5 302 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 SNX6Q9UNH7 406 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 ZNF451Q9Y4E5 1061 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 MMACHCQ9Y4U1 282 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 CCL27Q9Y4X3 112 aa11.62□□□□□ -0.55
APTX-220ENST00000476858 A0A088AWK7 358 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 CCDC151A5D8V7 595 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 TMEM200CA6NKL6 621 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 CTIFO43310 598 aaKnown RBP11.61□□□□□ -0.55
APTX-220ENST00000476858 TRIM13O60858 407 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 SEMA3DO95025 777 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 MLYCDO95822 493 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 DDAH2O95865 285 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 WDPCPO95876 746 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 CYC1P08574 325 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 ZNF10P21506 573 aaPredicted RBP11.61□□□□□ -0.55
APTX-220ENST00000476858 SOX18P35713 384 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 PHEXP78562 749 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 IGLV3-21P80748 117 aaPredicted RBP11.61□□□□□ -0.55
APTX-220ENST00000476858 TLE1Q04724 770 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 MFAP5Q13361 173 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 ARL13AQ5H913 290 aaPredicted RBP11.61□□□□□ -0.55
APTX-220ENST00000476858 AGAP7PQ5VUJ5 663 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 H3F3CQ6NXT2 135 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 IGFL3Q6UXB1 125 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 LRIG3Q6UXM1 1119 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 ZNF605Q86T29 641 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 NUDT13Q86X67 352 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 BEST3Q8N1M1 668 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 TEX19Q8NA77 164 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 SIMC1Q8NDZ2 872 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 SRFBP1Q8NEF9 429 aaKnown RBP11.61□□□□□ -0.55
APTX-220ENST00000476858 THAP3Q8WTV1 239 aaPredicted RBP11.61□□□□□ -0.55
APTX-220ENST00000476858 NCLNQ969V3 563 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 ARL8AQ96BM9 186 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 TM4SF18Q96CE8 201 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 C11orf24Q96F05 449 aaPredicted RBP11.61□□□□□ -0.55
APTX-220ENST00000476858 AGAP4Q96P64 663 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 LPAR4Q99677 370 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 EBPLQ9BY08 206 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 HES7Q9BYE0 225 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 ROGDIQ9GZN7 287 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 RPF2Q9H7B2 306 aaKnown RBP11.61□□□□□ -0.55
APTX-220ENST00000476858 KCNK13Q9HB14 408 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 MMP25Q9NPA2 562 aa11.61□□□□□ -0.55
APTX-220ENST00000476858 C19orf25Q9UFG5 118 aaPredicted RBP11.61□□□□□ -0.55
APTX-220ENST00000476858 GCN1Q92616 2671 aaKnown RBP11.61□□□□□ -0.55
APTX-220ENST00000476858 TRBV11-1A0A0K0K1C0 115 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 ZNF354AO60765 605 aaPredicted RBP11.6□□□□□ -0.55
APTX-220ENST00000476858 ULK1O75385 1050 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 KRT6AP02538 564 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 CLPSP04118 112 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 KRT6BP04259 564 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 JUNP05412 331 aaKnown RBP11.6□□□□□ -0.55
APTX-220ENST00000476858 ENO1P06733 434 aaKnown RBP11.6□□□□□ -0.55
APTX-220ENST00000476858 DHRS4L1P0CG22 281 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms