RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 BSGP35613 385 aa15.66■□□□□ 0.1
TMEM53-208ENST00000476724 LIMS1P48059 325 aa15.66■□□□□ 0.1
TMEM53-208ENST00000476724 SAXO2Q658L1 398 aa15.66■□□□□ 0.1
TMEM53-208ENST00000476724 ZNF605Q86T29 641 aa15.66■□□□□ 0.1
TMEM53-208ENST00000476724 RAB42Q8N4Z0 105 aa15.66■□□□□ 0.1
TMEM53-208ENST00000476724 TM4SF18Q96CE8 201 aa15.66■□□□□ 0.1
TMEM53-208ENST00000476724 ITPAQ9BY32 194 aa15.66■□□□□ 0.1
TMEM53-208ENST00000476724 SLC23A2Q9UGH3 650 aa15.66■□□□□ 0.1
TMEM53-208ENST00000476724 ERGIC3Q9Y282 383 aa15.66■□□□□ 0.1
TMEM53-208ENST00000476724 NUMA1Q14980 2115 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 PRAMEF25A6NGN4 478 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 KMOO15229 486 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 MAGEB3O15480 346 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 MAN1A2O60476 641 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 ADAM23O75077 832 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 GADD45GO95257 159 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 VIPP01282 170 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 COL9A1P20849 921 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 REEP5Q00765 189 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 DGCR6Q14129 220 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 TBCEQ15813 527 aaPredicted RBP15.65■□□□□ 0.1
TMEM53-208ENST00000476724 DCDC5Q6ZRR9 648 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 ZNF554Q86TJ5 538 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 HDDC3Q8N4P3 179 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 C2orf73Q8N5S3 287 aaPredicted RBP15.65■□□□□ 0.1
TMEM53-208ENST00000476724 IL17RCQ8NAC3 791 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 OR52J3Q8NH60 311 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 CHPT1Q8WUD6 406 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 MAPKAP1Q9BPZ7 522 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 RHNO1Q9BSD3 238 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 ACAT2Q9BWD1 397 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 ZNF717Q9BY31 904 aaPredicted RBP15.65■□□□□ 0.1
TMEM53-208ENST00000476724 CXorf36Q9H7Y0 433 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 KCNK12Q9HB15 430 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 A4GALTQ9NPC4 353 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 FKBP14Q9NWM8 211 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 ADAM29Q9UKF5 820 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 RAB23Q9ULC3 237 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 ACSL5Q9ULC5 683 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 PRKAB1Q9Y478 270 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 PCYT1BQ9Y5K3 369 aaPredicted RBP15.65■□□□□ 0.1
TMEM53-208ENST00000476724 CORINQ9Y5Q5 1042 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 PIAS3Q9Y6X2 628 aa15.65■□□□□ 0.1
TMEM53-208ENST00000476724 PRAMEF33A0A0G2JMD5 474 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 TRBC2A0A5B9 178 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 IGLON5A6NGN9 336 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 PDPK1O15530 556 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 PRAMEF10O60809 474 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 PDE9AO76083 593 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 CCNB2O95067 398 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 TBX6O95947 436 aaPredicted RBP15.64■□□□□ 0.09
TMEM53-208ENST00000476724 IFNW1P05000 195 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 OPRL1P41146 370 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 MANFP55145 182 aaKnown RBP15.64■□□□□ 0.09
TMEM53-208ENST00000476724 RGS21Q2M5E4 152 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 CEACAM20Q6UY09 585 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 SLC44A3Q8N4M1 653 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 DNAJC22Q8N4W6 341 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 TMCO5AQ8N6Q1 288 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 SLC38A4Q969I6 547 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 LGALS12Q96DT0 336 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 SORBS1Q9BX66 1292 aaKnown RBP15.64■□□□□ 0.09
TMEM53-208ENST00000476724 ANKHQ9HCJ1 492 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 RHBDL2Q9NX52 303 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 SH3GLB1Q9Y371 365 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 SNX8Q9Y5X2 465 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 C5orf58C9J3I9 102 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 J3QRK9 145 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 CACNB4O00305 520 aaPredicted RBP15.64■□□□□ 0.09
TMEM53-208ENST00000476724 MPZL2O60487 215 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 SULT1C4O75897 302 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 PCDH8O95206 1070 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 CDK1P06493 297 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 CD36P16671 472 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 TEAD1P28347 426 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 NTSR1P30989 418 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 FRKP42685 505 aaPredicted RBP15.64■□□□□ 0.09
TMEM53-208ENST00000476724 AGERQ15109 404 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 CCDC85BQ15834 202 aaPredicted RBP15.64■□□□□ 0.09
TMEM53-208ENST00000476724 NUDT13Q86X67 352 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 ANKRD53Q8N9V6 530 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 DYNC2LI1Q8TCX1 351 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 PHF10Q8WUB8 498 aaKnown RBP15.64■□□□□ 0.09
TMEM53-208ENST00000476724 RGMAQ96B86 450 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 F2RL3Q96RI0 385 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 NIPSNAP1Q9BPW8 284 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 MENTQ9BUN1 341 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 FBXO8Q9NRD0 319 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 RLIMQ9NVW2 624 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 ZNF451Q9Y4E5 1061 aa15.64■□□□□ 0.09
TMEM53-208ENST00000476724 SOX1O00570 391 aaPredicted RBP15.63■□□□□ 0.09
TMEM53-208ENST00000476724 ADH1BP00325 375 aa15.63■□□□□ 0.09
TMEM53-208ENST00000476724 PCCBP05166 539 aa15.63■□□□□ 0.09
TMEM53-208ENST00000476724 ASGR2P07307 311 aa15.63■□□□□ 0.09
TMEM53-208ENST00000476724 SLC35G4P0C7Q5 338 aa15.63■□□□□ 0.09
TMEM53-208ENST00000476724 OCM2P0CE71 109 aa15.63■□□□□ 0.09
TMEM53-208ENST00000476724 OCMP0CE72 109 aaPredicted RBP15.63■□□□□ 0.09
TMEM53-208ENST00000476724 C5AR1P21730 350 aa15.63■□□□□ 0.09
TMEM53-208ENST00000476724 VBP1P61758 197 aa15.63■□□□□ 0.09
TMEM53-208ENST00000476724 TRA2BP62995 288 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms