RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 TNNI3P19429 210 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 SSR2P43308 183 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 MAGEA12P43365 314 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 MEOX1P50221 254 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 IGLV3-21P80748 117 aaPredicted RBP10.03□□□□□ -0.8
SEC13-214ENST00000476597 ID2Q02363 134 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 DDX39BQ13838 428 aaKnown RBP10.03□□□□□ -0.8
SEC13-214ENST00000476597 GTF2H2Q13888 395 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 GLE1Q53GS7 698 aaKnown RBP10.03□□□□□ -0.8
SEC13-214ENST00000476597 GTF2H2CQ6P1K8 395 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 RPTNQ6XPR3 784 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 BNC2Q6ZN30 1099 aaPredicted RBP10.03□□□□□ -0.8
SEC13-214ENST00000476597 MYLK4Q86YV6 388 aaPredicted RBP10.03□□□□□ -0.8
SEC13-214ENST00000476597 OR4N5Q8IXE1 308 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 GPALPP1Q8IXQ4 340 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 CYP4Z2PQ8N1L4 340 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 PLD6Q8N2A8 252 aaKnown RBP10.03□□□□□ -0.8
SEC13-214ENST00000476597 ZCCHC7Q8N3Z6 543 aaKnown RBP10.03□□□□□ -0.8
SEC13-214ENST00000476597 ZNF321PQ8N8H1 164 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 L3MBTL4Q8NA19 623 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 ZFP62Q8NB50 900 aaPredicted RBP10.03□□□□□ -0.8
SEC13-214ENST00000476597 NOA1Q8NC60 698 aaKnown RBP10.03□□□□□ -0.8
SEC13-214ENST00000476597 OR8K3Q8NH51 312 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 IFT81Q8WYA0 676 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 MAGED4Q96JG8 741 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 MTERF1Q99551 399 aaKnown RBP10.03□□□□□ -0.8
SEC13-214ENST00000476597 OR8D2Q9GZM6 311 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 VPS11Q9H270 941 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 CDC42EP4Q9H3Q1 356 aaKnown RBP10.03□□□□□ -0.8
SEC13-214ENST00000476597 RPF2Q9H7B2 306 aaKnown RBP10.03□□□□□ -0.8
SEC13-214ENST00000476597 IPPKQ9H8X2 491 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 PRM3Q9NNZ6 103 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 TIMMDC1Q9NPL8 285 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 DMRT3Q9NQL9 472 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 ZNF358Q9NW07 568 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 MS4A12Q9NXJ0 267 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 TINAGQ9UJW2 476 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 RNF11Q9Y3C5 154 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 DCHS2Q6V1P9 2916 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 A8MVJ9 347 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 WWP2O00308 870 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 FOXE1O00358 373 aaPredicted RBP10.02□□□□□ -0.81
SEC13-214ENST00000476597 PLPP1O14494 284 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 ZNHIT1O43257 154 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 HNRNPRO43390 633 aaKnown RBP10.02□□□□□ -0.81
SEC13-214ENST00000476597 PROM1O43490 865 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 FGF17O60258 216 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 SIX3O95343 332 aaPredicted RBP10.02□□□□□ -0.81
SEC13-214ENST00000476597 ACSL3O95573 720 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 INHBAP08476 426 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 RBP1P09455 135 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 ESRRAP11474 423 aaPredicted RBP10.02□□□□□ -0.81
SEC13-214ENST00000476597 COL6A2P12110 1019 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 AGAP20933 346 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 GRNP28799 593 aaKnown RBP10.02□□□□□ -0.81
SEC13-214ENST00000476597 ECHS1P30084 290 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 BSGP35613 385 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 STT3AP46977 705 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 PIK3CGP48736 1102 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 SERPINB9P50453 376 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 NEK2P51955 445 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 HK2P52789 917 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 RPS13P62277 151 aaKnown RBP10.02□□□□□ -0.81
SEC13-214ENST00000476597 RNF4P78317 190 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 ADORA2A-AS1P86434 159 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 HSF1Q00613 529 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 CUL3Q13618 768 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 CPSF6Q16630 551 aaKnown RBP eCLIP10.02□□□□□ -0.81
SEC13-214ENST00000476597 TECRLQ5HYJ1 363 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 MRM1Q6IN84 353 aaKnown RBP10.02□□□□□ -0.81
SEC13-214ENST00000476597 XKRXQ6PP77 449 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 GOLGA7Q7Z5G4 137 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 FGD2Q7Z6J4 655 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 GPR180Q86V85 440 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 DOLPP1Q86YN1 238 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 TICAM1Q8IUC6 712 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 PTGR2Q8N8N7 351 aaPredicted RBP10.02□□□□□ -0.81
SEC13-214ENST00000476597 PSD4Q8NDX1 1056 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 MNS1Q8NEH6 495 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 OR5L2Q8NGL0 311 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 WDR20Q8TBZ3 569 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 SLC2A12Q8TD20 617 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 ZNF721Q8TF20 911 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 ZNF592Q92610 1267 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 TANKQ92844 425 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 REPS1Q96D71 796 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 RBM18Q96H35 190 aaKnown RBP10.02□□□□□ -0.81
SEC13-214ENST00000476597 SENP5Q96HI0 755 aaPredicted RBP10.02□□□□□ -0.81
SEC13-214ENST00000476597 RASL10BQ96S79 203 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 CENPKQ9BS16 269 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 ZNF717Q9BY31 904 aaPredicted RBP10.02□□□□□ -0.81
SEC13-214ENST00000476597 NOL11Q9H8H0 719 aaKnown RBP10.02□□□□□ -0.81
SEC13-214ENST00000476597 DDX31Q9H8H2 851 aaKnown RBP10.02□□□□□ -0.81
SEC13-214ENST00000476597 DEPPQ9NTK1 212 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 HPF1Q9NWY4 346 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 CPSF2Q9P2I0 782 aaKnown RBP10.02□□□□□ -0.81
SEC13-214ENST00000476597 ZNF180Q9UJW8 692 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 PPT2Q9UMR5 302 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 ERVK-11Q9UQG0 969 aa10.02□□□□□ -0.81
SEC13-214ENST00000476597 MEMO1Q9Y316 297 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms