RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 MAN1A2O60476 641 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 OTCP00480 354 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 IFNA16P05015 189 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 CA7P43166 264 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 ARFIP1P53367 373 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 PMP22Q01453 160 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 IFT88Q13099 833 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 TRAF3Q13114 568 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 KRTCAP3Q53RY4 240 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 C10orf62Q5T681 223 aaPredicted RBP15.11■□□□□ 0.01
COL1A1-205ENST00000476387 MILR1Q7Z6M3 343 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 RPS19BP1Q86WX3 136 aaKnown RBP15.11■□□□□ 0.01
COL1A1-205ENST00000476387 TICAM1Q8IUC6 712 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 KIF2BQ8N4N8 673 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 B3GNT7Q8NFL0 401 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 WDR20Q8TBZ3 569 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 ZNF483Q8TF39 744 aaPredicted RBP15.11■□□□□ 0.01
COL1A1-205ENST00000476387 THAP3Q8WTV1 239 aaPredicted RBP15.11■□□□□ 0.01
COL1A1-205ENST00000476387 SORBS1Q9BX66 1292 aaKnown RBP15.11■□□□□ 0.01
COL1A1-205ENST00000476387 MS4A12Q9NXJ0 267 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 ANKRD10Q9NXR5 420 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 KCMF1Q9P0J7 381 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 TMEM216Q9P0N5 145 aa15.11■□□□□ 0.01
COL1A1-205ENST00000476387 SMIM23A6NLE4 172 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 FOXE1O00358 373 aaPredicted RBP15.1■□□□□ 0.01
COL1A1-205ENST00000476387 HNRNPRO43390 633 aaKnown RBP15.1■□□□□ 0.01
COL1A1-205ENST00000476387 CTNSO60931 367 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 NEURL1O76050 574 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 SHBGP04278 402 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 SP1P08047 785 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 SBK3P0C264 359 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 PYGBP11216 843 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 KRT15P19012 456 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 SLCO1A2P46721 670 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 CLCN2P51788 898 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 CASP6P55212 293 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 HERVK_113P63132 956 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 OC90Q02509 493 aaPredicted RBP15.1■□□□□ 0.01
COL1A1-205ENST00000476387 SLAMF1Q13291 335 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 ART3Q13508 389 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 CUL3Q13618 768 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 SERTAD2Q14140 314 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 ELAVL1Q15717 326 aaKnown RBP15.1■□□□□ 0.01
COL1A1-205ENST00000476387 GGTA1PQ4G0N0 100 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 FRG2Q64ET8 278 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 SPINK14Q6IE38 97 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 CYP20A1Q6UW02 462 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 RPTNQ6XPR3 784 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 RPS27LQ71UM5 84 aaKnown RBP15.1■□□□□ 0.01
COL1A1-205ENST00000476387 NUDT13Q86X67 352 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 SLC22A9Q8IVM8 553 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 ARMC10Q8N2F6 343 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 TMEM132CQ8N3T6 1108 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 ZCCHC7Q8N3Z6 543 aaKnown RBP15.1■□□□□ 0.01
COL1A1-205ENST00000476387 FAM98AQ8NCA5 519 aaKnown RBP15.1■□□□□ 0.01
COL1A1-205ENST00000476387 ITLN2Q8WWU7 325 aaPredicted RBP15.1■□□□□ 0.01
COL1A1-205ENST00000476387 VMP1Q96GC9 406 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 FRG2BQ96QU4 278 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 SERPINI1Q99574 410 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 C1QTNF3Q9BXJ4 246 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 ERVK-6Q9BXR3 956 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 DEFB126Q9BYW3 111 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 ELOVL6Q9H5J4 265 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 CDCP1Q9H5V8 836 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 TRIM45Q9H8W5 580 aaPredicted RBP15.1■□□□□ 0.01
COL1A1-205ENST00000476387 ANKZF1Q9H8Y5 726 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 ZBTB26Q9HCK0 441 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 KLHL1Q9NR64 748 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 LYARQ9NX58 379 aaKnown RBP15.1■□□□□ 0.01
COL1A1-205ENST00000476387 PPT2Q9UMR5 302 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 KLF2Q9Y5W3 355 aaPredicted RBP15.1■□□□□ 0.01
COL1A1-205ENST00000476387 CLCA3PQ9Y6N3 262 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 PCNX1Q96RV3 2341 aa15.1■□□□□ 0.01
COL1A1-205ENST00000476387 TRBV11-1A0A0K0K1C0 115 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 TGFBR3LH3BV60 316 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 CCL21O00585 134 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 FCHO1O14526 889 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 SLC19A2O60779 497 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 LDB3O75112 727 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 GLRA3O75311 464 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 SUPT7LO94864 414 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 SEMA3DO95025 777 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 ATP5F1P24539 256 aaPredicted RBP15.09■□□□□ 0.01
COL1A1-205ENST00000476387 PPP2R1BP30154 601 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 TLX1P31314 330 aaPredicted RBP15.09■□□□□ 0.01
COL1A1-205ENST00000476387 BUD31P41223 144 aaPredicted RBP15.09■□□□□ 0.01
COL1A1-205ENST00000476387 NEK2P51955 445 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 CDH13P55290 713 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 MLF1P58340 268 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 TNFRSF17Q02223 184 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 ALDH6A1Q02252 535 aaKnown RBP15.09■□□□□ 0.01
COL1A1-205ENST00000476387 SLC25A25Q6KCM7 469 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 GPR180Q86V85 440 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 TMEM151AQ8N4L1 468 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 ZNF808Q8N4W9 903 aaPredicted RBP15.09■□□□□ 0.01
COL1A1-205ENST00000476387 C7orf57Q8NEG2 295 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 NFAM1Q8NET5 270 aaPredicted RBP15.09■□□□□ 0.01
COL1A1-205ENST00000476387 OR4F6Q8NGB9 312 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 MZB1Q8WU39 189 aa15.09■□□□□ 0.01
COL1A1-205ENST00000476387 DAZLQ92904 295 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms