RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 SHISA7A6NL88 538 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 FAM47E-STBD1D6RA91 191 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 LOC110117498-PIK3R3F6TDL0 507 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 H0Y626 953 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 K7ERQ8 282 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 FOXE1O00358 373 aaPredicted RBP6.55□□□□□ -1.36
UBR4-212ENST00000475973 PLK4O00444 970 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 ADAMDEC1O15204 470 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 KMOO15229 486 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 SCO2O43819 266 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 AIREO43918 545 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 FAM20BO75063 409 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 ATG13O75143 517 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 SLITRK5O94991 958 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 EPN2O95208 641 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 TRIM16O95361 564 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 GUCA1CO95843 209 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 RPLP0P05388 317 aaKnown RBP6.55□□□□□ -1.36
UBR4-212ENST00000475973 GSNP06396 782 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 GSTM1P09488 218 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 LAMP1P11279 417 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 LHCGRP22888 699 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 S100A1P23297 94 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 PSMB9P28065 219 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 C21orf33P30042 268 aaPredicted RBP6.55□□□□□ -1.36
UBR4-212ENST00000475973 TGFBR1P36897 503 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 CSKP41240 450 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 CASP3P42574 277 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 SOX9P48436 509 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 TMED10P49755 219 aaKnown RBP6.55□□□□□ -1.36
UBR4-212ENST00000475973 TPD52P55327 224 aaPredicted RBP6.55□□□□□ -1.36
UBR4-212ENST00000475973 PLIN5Q00G26 463 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 BCL2L1Q07817 233 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 GPR50Q13585 617 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 PUM1Q14671 1186 aaKnown RBP eCLIP6.55□□□□□ -1.36
UBR4-212ENST00000475973 CPSF6Q16630 551 aaKnown RBP eCLIP6.55□□□□□ -1.36
UBR4-212ENST00000475973 TIGD6Q17RP2 521 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 MPEG1Q2M385 716 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.55□□□□□ -1.362e-7■■■□□ 18
UBR4-212ENST00000475973 ATP13A5Q4VNC0 1218 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 PERM1Q5SV97 790 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 TPRG1LQ5T0D9 272 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 ATXN7L2Q5T6C5 722 aaPredicted RBP6.55□□□□□ -1.36
UBR4-212ENST00000475973 ATAD3BQ5T9A4 648 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 AGAP6Q5VW22 663 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 TXNDC8Q6A555 127 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 RETSATQ6NUM9 610 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 CD300LDQ6UXZ3 194 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 LINGO4Q6UY18 593 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 MBOAT1Q6ZNC8 495 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 UBE2R2Q712K3 238 aaPredicted RBP6.55□□□□□ -1.36
UBR4-212ENST00000475973 DGLUCYQ7Z3D6 616 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 KIAA0907Q7Z7F0 614 aaPredicted RBP6.55□□□□□ -1.36
UBR4-212ENST00000475973 GALNT5Q7Z7M9 940 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 ADCK1Q86TW2 530 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 ZBTB46Q86UZ6 589 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 VRK3Q8IV63 474 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 MMAAQ8IVH4 418 aaKnown RBP6.55□□□□□ -1.36
UBR4-212ENST00000475973 SLC22A15Q8IZD6 547 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 CYP4Z2PQ8N1L4 340 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 METTL4Q8N3J2 472 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 PARP16Q8N5Y8 322 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 AMER2Q8N7J2 671 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 SUMF1Q8NBK3 374 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 KBTBD8Q8NFY9 601 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 OR2AP1Q8NGE2 309 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 OR52N2Q8NGI0 321 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 OR6F1Q8NGZ6 308 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 CLHC1Q8NHS4 586 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 PIK3R3Q92569 461 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 CCDC74AQ96AQ1 378 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 MTERF3Q96E29 417 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 APOLD1Q96LR9 279 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 AGAP4Q96P64 663 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 TSSK3Q96PN8 268 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 OR2A14Q96R47 310 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 FEVQ99581 238 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 COPS8Q99627 209 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 EGFL8Q99944 293 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 MAPKAP1Q9BPZ7 522 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 SOSTQ9BQB4 213 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 DUSP26Q9BV47 211 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 RSPO3Q9BXY4 272 aaPredicted RBP6.55□□□□□ -1.36
UBR4-212ENST00000475973 SLC46A2Q9BY10 475 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 ZCCHC2Q9C0B9 1178 aaKnown RBP6.55□□□□□ -1.36
UBR4-212ENST00000475973 SMG9Q9H0W8 520 aaKnown RBP6.55□□□□□ -1.36
UBR4-212ENST00000475973 ELOVL6Q9H5J4 265 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 SYNDIG1Q9H7V2 258 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 SARS2Q9NP81 518 aaKnown RBP6.55□□□□□ -1.36
UBR4-212ENST00000475973 ACER3Q9NUN7 267 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 TRPM5Q9NZQ8 1165 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 ZNF282Q9UDV7 671 aaPredicted RBP6.55□□□□□ -1.36
UBR4-212ENST00000475973 ACAD8Q9UKU7 415 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 GRIP1Q9Y3R0 1128 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 PCDHGB2Q9Y5G2 931 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 U3KQV3 271 aa6.55□□□□□ -1.36
UBR4-212ENST00000475973 IQCMA0A1B0GVH7 501 aa6.54□□□□□ -1.36
UBR4-212ENST00000475973 EFCAB10A6NFE3 127 aa6.54□□□□□ -1.36
UBR4-212ENST00000475973 NPIPB15A6NHN6 443 aaPredicted RBP6.54□□□□□ -1.36
UBR4-212ENST00000475973 MPZL2O60487 215 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms