RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 TUBB4AP04350 444 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 IGKV3-11P04433 115 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 IFNA16P05015 189 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 TPOP07202 933 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 HIST1H1TP22492 207 aaPredicted RBP6.5□□□□□ -1.37
HDAC3-207ENST00000475549 MAGEA4P43358 317 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 HK2P52789 917 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 SLC12A2P55011 1212 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 PPIAP62937 165 aaKnown RBP6.5□□□□□ -1.37
HDAC3-207ENST00000475549 RNF4P78317 190 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 IRF9Q00978 393 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 GXYLT1Q4G148 440 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 PIGGQ5H8A4 983 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 DEPDC1Q5TB30 811 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 KHDRBS2Q5VWX1 349 aaKnown RBP6.5□□□□□ -1.37
HDAC3-207ENST00000475549 C18orf63Q68DL7 685 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 RTL6Q6ICC9 239 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 OR4C11Q6IEV9 310 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 LYPD8Q6UX82 237 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 CEP128Q6ZU80 1094 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 GDF7Q7Z4P5 450 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 CD163Q86VB7 1156 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 CCDC71Q8IV32 467 aaPredicted RBP6.5□□□□□ -1.37
HDAC3-207ENST00000475549 CTAGE3PQ8IX95 158 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 TMEM132CQ8N3T6 1108 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 PPM1NQ8N819 430 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 MORN4Q8NDC4 146 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 OR2M7Q8NG81 312 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 OR8K3Q8NH51 312 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 LILRB4Q8NHJ6 448 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 HUS1BQ8NHY5 278 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 STAG3L4Q8TBR4 150 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 SLC2A12Q8TD20 617 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 UBTD2Q8WUN7 234 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 CDKL2Q92772 493 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 DAZLQ92904 295 aaKnown RBP6.5□□□□□ -1.37
HDAC3-207ENST00000475549 EXT2Q93063 718 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 SDCCAG3Q96C92 435 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 TTTY12Q9BZ98 90 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 RUBCNLQ9H714 662 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 CNOT10Q9H9A5 744 aaKnown RBP6.5□□□□□ -1.37
HDAC3-207ENST00000475549 SH2D2AQ9NP31 389 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 TIMMDC1Q9NPL8 285 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 NPDC1Q9NQX5 325 aaPredicted RBP6.5□□□□□ -1.37
HDAC3-207ENST00000475549 PNPLA3Q9NST1 481 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 TNFRSF10DQ9UBN6 386 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 PPT2Q9UMR5 302 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 ATG4BQ9Y4P1 393 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 LIPGQ9Y5X9 500 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 HIVEP1P15822 2718 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 A0A088AWK7 358 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 A0A1B0GVC2 190 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 A0A1W2PR48 441 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 A0A1W2PS29 197 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 ESYT3A0FGR9 886 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 NKX2-6A6NCS4 301 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 A8MVJ9 347 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 K7EPI3 171 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 PLPP1O14494 284 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 PROM1O43490 865 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 TMPRSS11DO60235 418 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 KERAO60938 352 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 EEDO75530 441 aaKnown RBP6.49□□□□□ -1.37
HDAC3-207ENST00000475549 TOXO94900 526 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 NADKO95544 446 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-207ENST00000475549 IGHG3P01860 377 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 CLPSP04118 112 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 C2P06681 752 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 GSTA2P09210 222 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 LTA4HP09960 611 aaKnown RBP6.49□□□□□ -1.37
HDAC3-207ENST00000475549 RFPL3SP0C7P2 107 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 CCL3P10147 92 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 PCNAP12004 261 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 TNNI3P19429 210 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 ENDOUP21128 410 aaKnown RBP6.49□□□□□ -1.37
HDAC3-207ENST00000475549 ZNF10P21506 573 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-207ENST00000475549 CNR1P21554 472 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 SPRP35270 261 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-207ENST00000475549 BSGP35613 385 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 PIGAP37287 484 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 MAGEA5P43359 124 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 DNASE1L1P49184 302 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 NEK2P51955 445 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 HNRNPH2P55795 449 aaKnown RBP6.49□□□□□ -1.37
HDAC3-207ENST00000475549 SLC7A5Q01650 507 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 PMPCAQ10713 525 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 ASPHQ12797 758 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 STX4Q12846 297 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 ILF2Q12905 390 aaKnown RBP6.49□□□□□ -1.37
HDAC3-207ENST00000475549 CALCOCO2Q13137 446 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 SLAMF1Q13291 335 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 LAPTM5Q13571 262 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 NAA30Q147X3 362 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-207ENST00000475549 TESK1Q15569 626 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 MPEG1Q2M385 716 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 HYAL4Q2M3T9 481 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 AP5B1Q2VPB7 878 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 ZNF791Q3KP31 576 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-207ENST00000475549 TMEM35AQ53FP2 167 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 PAGE2BQ5JRK9 111 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms