RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 NOP53Q9NZM5 478 aaKnown RBP14.75□□□□□ -0.05
CPSF3-203ENST00000475482 ARMCX1Q9P291 453 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 TAGLN3Q9UI15 199 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 TMED5Q9Y3A6 229 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 TTLL8A6PVC2 850 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 CAPN14A8MX76 684 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 NPIPB8E9PQR5 432 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 FOXE1O00358 373 aaPredicted RBP14.74□□□□□ -0.05
CPSF3-203ENST00000475482 LSM1O15116 133 aaKnown RBP14.74□□□□□ -0.05
CPSF3-203ENST00000475482 PEX11AO75192 247 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 UNC5CO95185 931 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 PDYNP01213 254 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 CDH1P12830 882 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 FBLP22087 321 aaKnown RBP14.74□□□□□ -0.05
CPSF3-203ENST00000475482 PRPH2P23942 346 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 GSTM2P28161 218 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 HTR6P50406 440 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 RPS15AP62244 130 aaKnown RBP14.74□□□□□ -0.05
CPSF3-203ENST00000475482 EMX2Q04743 252 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 SRSF1Q07955 248 aaKnown RBP eCLIP14.74□□□□□ -0.05
CPSF3-203ENST00000475482 DMTNQ08495 405 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 RAPSNQ13702 412 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 UBAP2LQ14157 1087 aaKnown RBP14.74□□□□□ -0.05
CPSF3-203ENST00000475482 SLBPQ14493 270 aaKnown RBP eCLIP14.74□□□□□ -0.05
CPSF3-203ENST00000475482 AP5B1Q2VPB7 878 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 VWA2Q5GFL6 755 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 TCHHL1Q5QJ38 904 aaPredicted RBP14.74□□□□□ -0.05
CPSF3-203ENST00000475482 C6orf136Q5SQH8 315 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 CATSPEREQ5SY80 951 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 SCIMPQ6UWF3 145 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 IGFL2Q6UWQ7 119 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 SHISA6Q6ZSJ9 500 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 LAPTM4BQ86VI4 370 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 TTLQ8NG68 377 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 OR7G3Q8NG95 312 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 OR4K1Q8NGD4 311 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 WDR20Q8TBZ3 569 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 CPT1CQ8TCG5 803 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 CMTM7Q96FZ5 175 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 CRB3Q9BUF7 120 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 LRTM1Q9HBL6 345 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 C1orf109Q9NX04 203 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 SLC12A4Q9UP95 1085 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 EIF3LQ9Y262 564 aaKnown RBP14.74□□□□□ -0.05
CPSF3-203ENST00000475482 PTGDR2Q9Y5Y4 395 aa14.74□□□□□ -0.05
CPSF3-203ENST00000475482 COPG1Q9Y678 874 aaKnown RBP14.74□□□□□ -0.05
CPSF3-203ENST00000475482 USP9YO00507 2555 aaPredicted RBP14.74□□□□□ -0.05
CPSF3-203ENST00000475482 POLEQ07864 2286 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 SCN2AQ99250 2005 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 SEC22BO75396 215 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 ALPPP05187 535 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 PCNAP12004 261 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 VARSP26640 1264 aaKnown RBP14.73□□□□□ -0.05
CPSF3-203ENST00000475482 PIK3CBP42338 1070 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 MRPL19P49406 292 aaKnown RBP14.73□□□□□ -0.05
CPSF3-203ENST00000475482 HNRNPH2P55795 449 aaKnown RBP14.73□□□□□ -0.05
CPSF3-203ENST00000475482 Q0VFX4 171 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 KLF10Q13118 480 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 HERC3Q15034 1050 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 CRB2Q5IJ48 1285 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 TMEM198Q66K66 360 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 TMIGD1Q6UXZ0 262 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 Q6ZSR9 355 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 ADCK2Q7Z695 626 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 MIER2Q8N344 545 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 GALNT11Q8NCW6 608 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 RP9Q8TA86 221 aaKnown RBP14.73□□□□□ -0.05
CPSF3-203ENST00000475482 MTFMTQ96DP5 389 aaKnown RBP14.73□□□□□ -0.05
CPSF3-203ENST00000475482 VPS50Q96JG6 964 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 MESP1Q9BRJ9 268 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 ZNF385DQ9H6B1 395 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 ZBTB20Q9HC78 741 aaPredicted RBP14.73□□□□□ -0.05
CPSF3-203ENST00000475482 MKKSQ9NPJ1 570 aaPredicted RBP14.73□□□□□ -0.05
CPSF3-203ENST00000475482 C14orf105Q9NVL8 296 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.73□□□□□ -0.05
CPSF3-203ENST00000475482 C3orf18Q9UK00 162 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 PPT2Q9UMR5 302 aa14.73□□□□□ -0.05
CPSF3-203ENST00000475482 MRPS2Q9Y399 296 aaKnown RBP14.73□□□□□ -0.05
CPSF3-203ENST00000475482 SPTAN1Q13813 2472 aaKnown RBP14.73□□□□□ -0.05
CPSF3-203ENST00000475482 SPTBN1Q01082 2364 aaKnown RBP14.72□□□□□ -0.05
CPSF3-203ENST00000475482 A0A0A6YYC8 382 aaPredicted RBP14.72□□□□□ -0.05
CPSF3-203ENST00000475482 ANKDD1BA6NHY2 528 aa14.72□□□□□ -0.05
CPSF3-203ENST00000475482 H0YIG0 161 aa14.72□□□□□ -0.05
CPSF3-203ENST00000475482 I3L1I5 382 aaPredicted RBP14.72□□□□□ -0.05
CPSF3-203ENST00000475482 PSMD12O00232 456 aaPredicted RBP14.72□□□□□ -0.05
CPSF3-203ENST00000475482 PCDH17O14917 1159 aa14.72□□□□□ -0.05
CPSF3-203ENST00000475482 LCMT2O60294 686 aaKnown RBP14.72□□□□□ -0.05
CPSF3-203ENST00000475482 PRAMEF4O60810 478 aa14.72□□□□□ -0.05
CPSF3-203ENST00000475482 MYO1DO94832 1006 aa14.72□□□□□ -0.05
CPSF3-203ENST00000475482 NSA2O95478 260 aaKnown RBP14.72□□□□□ -0.05
CPSF3-203ENST00000475482 HPP00738 406 aa14.72□□□□□ -0.05
CPSF3-203ENST00000475482 ACPPP15309 386 aa14.72□□□□□ -0.05
CPSF3-203ENST00000475482 CD22P20273 847 aa14.72□□□□□ -0.05
CPSF3-203ENST00000475482 BCL6P41182 706 aa14.72□□□□□ -0.05
CPSF3-203ENST00000475482 EFNA3P52797 238 aa14.72□□□□□ -0.05
CPSF3-203ENST00000475482 INPP5JQ15735 1006 aaPredicted RBP14.72□□□□□ -0.05
CPSF3-203ENST00000475482 NDUFA9Q16795 377 aa14.72□□□□□ -0.05
CPSF3-203ENST00000475482 PLEKHN1Q494U1 663 aaPredicted RBP14.72□□□□□ -0.05
CPSF3-203ENST00000475482 PRAMEF9Q5VWM5 478 aa14.72□□□□□ -0.05
CPSF3-203ENST00000475482 TMEM214Q6NUQ4 689 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms