RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 RNF4P78317 190 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 ID2Q02363 134 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 FOXD4Q12950 439 aaPredicted RBP12.94□□□□□ -0.34
CCDC78-209ENST00000474647 RCN2Q14257 317 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 SLC10A1Q14973 349 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 SLC25A35Q3KQZ1 300 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 ADNP2Q6IQ32 1131 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 TRMT10BQ6PF06 316 aaKnown RBP12.94□□□□□ -0.34
CCDC78-209ENST00000474647 OPN5Q6U736 354 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 SLCO4C1Q6ZQN7 724 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 CREG2Q8IUH2 290 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 GOT1L1Q8NHS2 421 aaPredicted RBP12.94□□□□□ -0.34
CCDC78-209ENST00000474647 KIF18AQ8NI77 898 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 PTPMT1Q8WUK0 201 aaPredicted RBP12.94□□□□□ -0.34
CCDC78-209ENST00000474647 PDLIM5Q96HC4 596 aaKnown RBP12.94□□□□□ -0.34
CCDC78-209ENST00000474647 QRFPRQ96P65 431 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 COPS7AQ9UBW8 275 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 OARD1Q9Y530 152 aa12.94□□□□□ -0.34
CCDC78-209ENST00000474647 TRGV5A0A0B4J1U4 118 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 GOLGA6L10A0A0M3HER8 536 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 FAM95CA0A1B0GW59 222 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 FAM47E-STBD1D6RA91 191 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 CYR61O00622 381 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 SUSD5O60279 629 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 ZNF354AO60765 605 aaPredicted RBP12.93□□□□□ -0.34
CCDC78-209ENST00000474647 CTNSO60931 367 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 CLEC3AO75596 197 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 GSTM2P28161 218 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 HPDP32754 393 aaPredicted RBP12.93□□□□□ -0.34
CCDC78-209ENST00000474647 PIGAP37287 484 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 ELK3P41970 407 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 FNTAP49354 379 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 DGKQP52824 942 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 CDKL1Q00532 357 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 EFTUD2Q15029 972 aaKnown RBP eCLIP12.93□□□□□ -0.34
CCDC78-209ENST00000474647 TSNQ15631 228 aaKnown RBP12.93□□□□□ -0.34
CCDC78-209ENST00000474647 ADAMTSL2Q86TH1 951 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 NKAPQ8N5F7 415 aaKnown RBP12.93□□□□□ -0.34
CCDC78-209ENST00000474647 CAPZA3Q96KX2 299 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 SGCZQ96LD1 299 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 GSX1Q9H4S2 264 aaPredicted RBP12.93□□□□□ -0.34
CCDC78-209ENST00000474647 SEMA4BQ9NPR2 832 aaPredicted RBP12.93□□□□□ -0.34
CCDC78-209ENST00000474647 WWOXQ9NZC7 414 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 CRIM1Q9NZV1 1036 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 SPRR3Q9UBC9 169 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 RNF14Q9UBS8 474 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 CTNNAL1Q9UBT7 734 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 B4GALT7Q9UBV7 327 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 VTI1BQ9UEU0 232 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 ATG4BQ9Y4P1 393 aa12.93□□□□□ -0.34
CCDC78-209ENST00000474647 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.93□□□□□ -0.34
CCDC78-209ENST00000474647 URI1O94763 535 aaPredicted RBP12.92□□□□□ -0.34
CCDC78-209ENST00000474647 GABRA1P14867 456 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 ENDOUP21128 410 aaKnown RBP12.92□□□□□ -0.34
CCDC78-209ENST00000474647 SLC6A12P48065 614 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 KCNJ2P63252 427 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 TGM3Q08188 693 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 FOXO1Q12778 655 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 ASPHQ12797 758 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 FBXO48Q5FWF7 155 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 PRAMEF20Q5VT98 475 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 FBXW10Q5XX13 1052 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 ABHD17CQ6PCB6 329 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 VN1R5Q7Z5H4 357 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 SNX31Q8N9S9 440 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 OR5L2Q8NGL0 311 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 RHBDF1Q96CC6 855 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 JSRP1Q96MG2 331 aaPredicted RBP12.92□□□□□ -0.34
CCDC78-209ENST00000474647 F2RL3Q96RI0 385 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 MAPKAP1Q9BPZ7 522 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 PLAC1Q9HBJ0 212 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 DMRT3Q9NQL9 472 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 RASSF1Q9NS23 344 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 EDARQ9UNE0 448 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 PSAT1Q9Y617 370 aa12.92□□□□□ -0.34
CCDC78-209ENST00000474647 MED12LQ86YW9 2145 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 PROM1O43490 865 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 HCN1O60741 890 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 SH3BGRLO75368 114 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 LRATO95237 230 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 ETHE1O95571 254 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 TBX6O95947 436 aaPredicted RBP12.91□□□□□ -0.34
CCDC78-209ENST00000474647 COX7A2P14406 83 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 BMP5P22003 454 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 PAFAH1B1P43034 410 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 KCNC1P48547 511 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 SERTAD2Q14140 314 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 HYAL4Q2M3T9 481 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 ADPRMQ3LIE5 342 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 FLYWCH1Q4VC44 716 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 RIPPLY2Q5TAB7 128 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 CDC20BQ86Y33 519 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 PDIK1LQ8N165 341 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 LIX1Q8N485 282 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 FAM13CQ8NE31 585 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 OR8K3Q8NH51 312 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 SLC22A8Q8TCC7 542 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 ZNF721Q8TF20 911 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 ANKRD49Q8WVL7 239 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 ANKRD7Q92527 254 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms