RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 SFXN5Q8TD22 340 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 GEMIN6Q8WXD5 167 aaKnown RBP9.31□□□□□ -0.92
USP39-214ENST00000474572 LZICQ8WZA0 190 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 GAL3ST3Q96A11 431 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 NMD3Q96D46 503 aaKnown RBP9.31□□□□□ -0.92
USP39-214ENST00000474572 TPD52L3Q96J77 140 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 KCNC2Q96PR1 638 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 FAIM2Q9BWQ8 316 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 GLIPR2Q9H4G4 154 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 SERHL2Q9H4I8 314 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 KLHL31Q9H511 634 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 KCNK12Q9HB15 430 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 PDP1Q9P0J1 537 aaPredicted RBP9.31□□□□□ -0.92
USP39-214ENST00000474572 APOBEC3BQ9UH17 382 aaKnown RBP9.31□□□□□ -0.92
USP39-214ENST00000474572 KCND3Q9UK17 655 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 BLOC1S6Q9UL45 172 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 SNX7Q9UNH6 387 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 MAP4K5Q9Y4K4 846 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 PCDHGB1Q9Y5G3 927 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 KLK4Q9Y5K2 254 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 DGKBQ9Y6T7 804 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 MDC1Q14676 2089 aaKnown RBP9.31□□□□□ -0.92
USP39-214ENST00000474572 TCRBV21S2A2A0A5A6 115 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 FAM221BA6H8Z2 402 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 H0Y8X5 98 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 BTN3A3O00478 584 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 MRPS14O60783 128 aaKnown RBP9.3□□□□□ -0.92
USP39-214ENST00000474572 PRAMEF10O60809 474 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 GUCY1B2O75343 617 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 SEC14L2O76054 403 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 PDE9AO76083 593 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 HTR1AP08908 422 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 TFPTP0C1Z6 253 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 SMIM10L1P0DMW3 83 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 HOXB3P14651 431 aaPredicted RBP9.3□□□□□ -0.92
USP39-214ENST00000474572 ITGA2P17301 1181 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 ATP5A1P25705 553 aaKnown RBP9.3□□□□□ -0.92
USP39-214ENST00000474572 AK4P27144 223 aaPredicted RBP9.3□□□□□ -0.92
USP39-214ENST00000474572 HTR1BP28222 390 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 PCSK6P29122 969 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 AKT2P31751 481 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 ALDH9A1P49189 494 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 CCR5P51681 352 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 NUP107P57740 925 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 RPS15AP62244 130 aaKnown RBP9.3□□□□□ -0.92
USP39-214ENST00000474572 TEKQ02763 1124 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 RELAQ04206 551 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 PMS2P3Q13401 168 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 SLC9A5Q14940 896 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 KIR2DS3Q14952 304 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 TOR1AIP1Q5JTV8 583 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 NDUFAF5Q5TEU4 345 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 GTF2IRD2BQ6EKJ0 949 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 XAF1Q6GPH4 301 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 LAIR1Q6GTX8 287 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 CEACAM20Q6UY09 585 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 VN1R4Q7Z5H5 301 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 GTF2IRD2Q86UP8 949 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 ERI1Q8IV48 349 aaKnown RBP9.3□□□□□ -0.92
USP39-214ENST00000474572 FAM20CQ8IXL6 584 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 SPARTQ8N0X7 666 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 TTC29Q8NA56 475 aaPredicted RBP9.3□□□□□ -0.92
USP39-214ENST00000474572 OR13F1Q8NGS4 319 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 SUN3Q8TAQ9 357 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 SPPL2AQ8TCT8 520 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 MIPOL1Q8TD10 442 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 UCN3Q969E3 161 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 EXOSC8Q96B26 276 aaKnown RBP9.3□□□□□ -0.92
USP39-214ENST00000474572 SLC22A18Q96BI1 424 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 TM4SF19Q96DZ7 209 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 SMIM10Q96HG1 83 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 MPP4Q96JB8 637 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 DHRS1Q96LJ7 313 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 AMDHD1Q96NU7 426 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 C17orf62Q9BQA9 187 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 CHRDQ9H2X0 955 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 POLR1BQ9H9Y6 1135 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 SLC35C2Q9NQQ7 365 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 PRDM9Q9NQV7 894 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 LYARQ9NX58 379 aaKnown RBP9.3□□□□□ -0.92
USP39-214ENST00000474572 TMEM9Q9P0T7 183 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 EBF1Q9UH73 591 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 CES1P1Q9UKY3 287 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 CA5BQ9Y2D0 317 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 ENPP4Q9Y6X5 453 aa9.3□□□□□ -0.92
USP39-214ENST00000474572 LAMA2P24043 3122 aaKnown RBP9.29□□□□□ -0.92
USP39-214ENST00000474572 A0A1W2PR48 441 aa9.29□□□□□ -0.92
USP39-214ENST00000474572 CCDC160A6NGH7 325 aa9.29□□□□□ -0.92
USP39-214ENST00000474572 ISM1B1AKI9 464 aa9.29□□□□□ -0.92
USP39-214ENST00000474572 TNFRSF11BO00300 401 aa9.29□□□□□ -0.92
USP39-214ENST00000474572 HMGN4O00479 90 aa9.29□□□□□ -0.92
USP39-214ENST00000474572 ERI3O43414 337 aaKnown RBP9.29□□□□□ -0.92
USP39-214ENST00000474572 B4GAT1O43505 415 aa9.29□□□□□ -0.92
USP39-214ENST00000474572 MFN2O95140 757 aa9.29□□□□□ -0.92
USP39-214ENST00000474572 SEMA4FO95754 770 aa9.29□□□□□ -0.92
USP39-214ENST00000474572 IGHV4-34P06331 123 aa9.29□□□□□ -0.92
USP39-214ENST00000474572 ANXA8P13928 327 aa9.29□□□□□ -0.92
USP39-214ENST00000474572 ITIH1P19827 911 aa9.29□□□□□ -0.92
USP39-214ENST00000474572 AGXTP21549 392 aa9.29□□□□□ -0.92
USP39-214ENST00000474572 CD72P21854 359 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms