RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, human

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKS1B-206	ENST00000474215	EED	O75530	441 aa	Known RBP	10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	SLC25A12	O75746	678 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	LDLR	P01130	860 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	RNF224	P0DH78	156 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	MST1	P26927	711 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	BSG	P35613	385 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	PMP22	Q01453	160 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	SRSF11	Q05519	484 aa	Known RBP	10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	TRAF3	Q13114	568 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	BIK	Q13323	160 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	MAPKAPK3	Q16644	382 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	C4orf17	Q53FE4	359 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	C10orf62	Q5T681	223 aa	Predicted RBP	10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	FRG2	Q64ET8	278 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	TTC19	Q6DKK2	380 aa	Predicted RBP	10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	MILR1	Q7Z6M3	343 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	ZNF227	Q86WZ6	799 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	CNPY4	Q8N129	248 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	OR14A16	Q8NHC5	309 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	ZNF483	Q8TF39	744 aa	Predicted RBP	10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	FRG2B	Q96QU4	278 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	SERPINI1	Q99574	410 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	ZNF717	Q9BY31	904 aa	Predicted RBP	10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	HES7	Q9BYE0	225 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	EPB41L4B	Q9H329	900 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	L2HGDH	Q9H9P8	463 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	SEMA4B	Q9NPR2	832 aa	Predicted RBP	10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	TMEM216	Q9P0N5	145 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	SEC14L3	Q9UDX4	400 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	PPT2	Q9UMR5	302 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	YARS2	Q9Y2Z4	477 aa	Known RBP	10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	ATG4B	Q9Y4P1	393 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	ASB4	Q9Y574	426 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	ASPDH	A6ND91	283 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215		A8MT66	165 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	C17orf105	B2RV13	164 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	FGF17	O60258	216 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	NME2P1	O60361	137 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	ITGA10	O75578	1167 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	UNC5C	O95185	931 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	ETHE1	O95571	254 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	OTC	P00480	354 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	RPS17	P08708	135 aa	Known RBP	10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	STS	P08842	583 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	FAM58BP	P0C7Q3	252 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	TAC1	P20366	129 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	NME2	P22392	152 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	CDH13	P55290	713 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	HNRNPH2	P55795	449 aa	Known RBP	10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	KCNK10	P57789	538 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	IGLV3-21	P80748	117 aa	Predicted RBP	10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	ID2	Q02363	134 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	IFT88	Q13099	833 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	C18orf63	Q68DL7	685 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	MRM1	Q6IN84	353 aa	Known RBP	10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	CYP20A1	Q6UW02	462 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	GFRAL	Q6UXV0	394 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	HSDL2	Q6YN16	418 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	RPS27L	Q71UM5	84 aa	Known RBP	10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	GALNTL5	Q7Z4T8	443 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	OR4N5	Q8IXE1	308 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	TMEM156	Q8N614	296 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	FAM98A	Q8NCA5	519 aa	Known RBP	10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	OR4F6	Q8NGB9	312 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	ACMSD	Q8TDX5	336 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	TMEM125	Q96AQ2	219 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	RBM18	Q96H35	190 aa	Known RBP	10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	C1QTNF3	Q9BXJ4	246 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	OR8D2	Q9GZM6	311 aa		10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	LYAR	Q9NX58	379 aa	Known RBP	10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215	PLEKHB1	Q9UF11	243 aa	Predicted RBP	10.41	□□□□□ -0.74
CKS1B-206	ENST00000474215		A0A0A6YYD5	115 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215		A0A1B0GUH1	482 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215		A0A1W2PR48	441 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	TMEM200C	A6NKL6	621 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	GOLGA8R	I6L899	631 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	PPP6C	O00743	305 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	TMPRSS11D	O60235	418 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	PRKN	O60260	465 aa	Predicted RBP	10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	DLX3	O60479	287 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	OR2J2	O76002	312 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	WISP2	O76076	250 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	SEMA3D	O95025	777 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	GPR75	O95800	540 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	MLYCD	O95822	493 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	GSTA1	P08263	222 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	PYGB	P11216	843 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	COX7A2	P14406	83 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	TSPAN8	P19075	237 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	HSD17B3	P37058	310 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	BUD31	P41223	144 aa	Predicted RBP	10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	STT3A	P46977	705 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	SSR4	P51571	173 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	PER3	P56645	1201 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	HERVK_113	P63132	956 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	TNFRSF17	Q02223	184 aa		10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	ALDH6A1	Q02252	535 aa	Known RBP	10.4	□□□□□ -0.74
CKS1B-206	ENST00000474215	FOLH1	Q04609	750 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms