RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 GFPT2O94808 682 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 FGFR1OPO95684 399 aaKnown RBP1.35□□□□□ -2.19
CCDC39-203ENST00000473854 GNA14O95837 355 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 PIGRP01833 764 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 SERPING1P05155 500 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 LGALS2P05162 132 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CLEC3BP05452 202 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 GPIP06744 558 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 TPM1P09493 284 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CLTAP09496 248 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 RHOXF2BP0C7M4 288 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 ACP2P11117 423 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CYP2A7P20853 494 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CA6P23280 308 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 MAPK4P31152 587 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CASQ1P31415 396 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 SFNP31947 248 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CYLC1P35663 651 aaPredicted RBP1.35□□□□□ -2.19
CCDC39-203ENST00000473854 TCF7P36402 384 aaPredicted RBP1.35□□□□□ -2.19
CCDC39-203ENST00000473854 ARL2P36404 184 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 TNFSF9P41273 254 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 NAMPTP43490 491 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 GCLMP48507 274 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 VAMP7P51809 220 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 RPL7AP62424 266 aaKnown RBP1.35□□□□□ -2.19
CCDC39-203ENST00000473854 OLR1P78380 273 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 IRX3P78415 501 aaPredicted RBP1.35□□□□□ -2.19
CCDC39-203ENST00000473854 MAP2K1Q02750 393 aaPredicted RBP1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CYP24A1Q07973 514 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 ALCAMQ13740 583 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 GRB14Q14449 540 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 ADIPOQQ15848 244 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 SNRNP35Q16560 246 aaKnown RBP1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CCNG2Q16589 344 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CCL14Q16627 93 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CCL15Q16663 113 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 MEP1AQ16819 746 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 EXOC3L4Q17RC7 722 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 WHAMMP3Q1A5X7 153 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CCDC122Q5T0U0 273 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 SNX30Q5VWJ9 437 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 FAM180BQ6P0A1 224 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 SCARA5Q6ZMJ2 495 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 GBP6Q6ZN66 633 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CDHR3Q6ZTQ4 885 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 SEPT14Q6ZU15 432 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 TPRG1Q6ZUI0 275 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 USP50Q70EL3 339 aaPredicted RBP1.35□□□□□ -2.19
CCDC39-203ENST00000473854 ARMCX2Q7L311 632 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 HAUS6Q7Z4H7 955 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 MAATS1Q7Z4T9 603 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 PXKQ7Z7A4 578 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CPLX4Q7Z7G2 160 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 SLFN11Q7Z7L1 901 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 KIAA1328Q86T90 577 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CDR2LQ86X02 465 aaPredicted RBP1.35□□□□□ -2.19
CCDC39-203ENST00000473854 ERO1BQ86YB8 467 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CEP97Q8IW35 865 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 FAM71AQ8IYT1 594 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CCDC170Q8IYT3 715 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 METTL4Q8N3J2 472 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 PDCL2Q8N4E4 241 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CD177Q8N6Q3 437 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 POC5Q8NA72 575 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 XXYLT1Q8NBI6 393 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 TMEM116Q8NCL8 245 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 MSANTD4Q8NCY6 345 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 OR5B17Q8NGF7 314 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 OR8K1Q8NGG5 319 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 GOLGA5Q8TBA6 731 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 AFAP1L1Q8TED9 768 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 ATP8B4Q8TF62 1192 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 AENQ8WTP8 325 aaKnown RBP1.35□□□□□ -2.19
CCDC39-203ENST00000473854 U2AF1L4Q8WU68 220 aaKnown RBP1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CHPT1Q8WUD6 406 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 SHC3Q92529 594 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 KRT35Q92764 455 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 SYN2Q92777 582 aaPredicted RBP1.35□□□□□ -2.19
CCDC39-203ENST00000473854 KIFAP3Q92845 792 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 DAZLQ92904 295 aaKnown RBP1.35□□□□□ -2.19
CCDC39-203ENST00000473854 ATP6V0A1Q93050 837 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 SECISBP2LQ93073 1101 aaKnown RBP1.35□□□□□ -2.19
CCDC39-203ENST00000473854 AZIN2Q96A70 460 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CENPTQ96BT3 561 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 MS4A14Q96JA4 679 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CEP170P1Q96L14 293 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 C7orf26Q96N11 449 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 ACCSQ96QU6 501 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 PCDHB18PQ96TA0 734 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 SEPT5Q99719 369 aaPredicted RBP1.35□□□□□ -2.19
CCDC39-203ENST00000473854 RHOXF2Q9BQY4 288 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 PI4K2AQ9BTU6 479 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 NUP58Q9BVL2 599 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CCDC94Q9BW85 323 aaPredicted RBP1.35□□□□□ -2.19
CCDC39-203ENST00000473854 ITPAQ9BY32 194 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 EDEM3Q9BZQ6 932 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 TRIM7Q9C029 511 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 MTMR12Q9C0I1 747 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 SDCBP2Q9H190 292 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 WNT5BQ9H1J7 359 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms