RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 ABHD17BQ5VST6 288 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 FRMD7Q6ZUT3 714 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 OR4N5Q8IXE1 308 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 BEST3Q8N1M1 668 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 UCN3Q969E3 161 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 ALOXE3Q9BYJ1 711 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 SLC29A3Q9BZD2 475 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 TNFRSF12AQ9NP84 129 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 ADAP2Q9NPF8 381 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 OXSMQ9NWU1 459 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 LYARQ9NX58 379 aaKnown RBP17.69■□□□□ 0.42
PTCD3-210ENST00000473829 SLC17A7Q9P2U7 560 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 PHF11Q9UIL8 331 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 NTNG1Q9Y2I2 539 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 PLLPQ9Y342 182 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 SPACA6W5XKT8 324 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 A0A1W2PR48 441 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 WASHC1A8K0Z3 465 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 PROM1O43490 865 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 ESRRBO95718 433 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 TNFSF10P50591 281 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 GPR143P51810 404 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 FOXA1P55317 472 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 PKNOX1P55347 436 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 IGLV3-21P80748 117 aaPredicted RBP17.68■□□□□ 0.42
PTCD3-210ENST00000473829 GALNT1Q10472 559 aaPredicted RBP17.68■□□□□ 0.42
PTCD3-210ENST00000473829 TBL3Q12788 808 aaKnown RBP17.68■□□□□ 0.42
PTCD3-210ENST00000473829 ZNF169Q14929 603 aaPredicted RBP17.68■□□□□ 0.42
PTCD3-210ENST00000473829 TERF2Q15554 542 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 CYP20A1Q6UW02 462 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 COMMD6Q7Z4G1 85 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 C10orf107Q8IVU9 208 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 IQCKQ8N0W5 287 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 METTL4Q8N3J2 472 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 B3GNT7Q8NFL0 401 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 HAS2Q92819 552 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 ZBTB9Q96C00 473 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 SNRNP40Q96DI7 357 aaKnown RBP17.68■□□□□ 0.42
PTCD3-210ENST00000473829 C19orf60Q96EN9 201 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 RNF32Q9H0A6 362 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 RPF2Q9H7B2 306 aaKnown RBP17.68■□□□□ 0.42
PTCD3-210ENST00000473829 BRF2Q9HAW0 419 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 TEX10Q9NXF1 929 aaPredicted RBP17.68■□□□□ 0.42
PTCD3-210ENST00000473829 MS4A12Q9NXJ0 267 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 PPIEQ9UNP9 301 aaKnown RBP17.68■□□□□ 0.42
PTCD3-210ENST00000473829 STK38LQ9Y2H1 464 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 TIMM22Q9Y584 194 aa17.68■□□□□ 0.42
PTCD3-210ENST00000473829 DYTNA2CJ06 578 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 BLACEA4D250 179 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 GLOD5A6NK44 160 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 AIFM1O95831 613 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 IFNA16P05015 189 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 ENO1P06733 434 aaKnown RBP17.67■□□□□ 0.42
PTCD3-210ENST00000473829 KLK1P06870 262 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 NR2F6P10588 404 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 HMOX2P30519 316 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 FOLH1Q04609 750 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 STX4Q12846 297 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 TLR1Q15399 786 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 ELAVL1Q15717 326 aaKnown RBP17.67■□□□□ 0.42
PTCD3-210ENST00000473829 KRT71Q3SY84 523 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 CISD2Q8N5K1 135 aaKnown RBP17.67■□□□□ 0.42
PTCD3-210ENST00000473829 SLC5A8Q8N695 610 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 METTL6Q8TCB7 284 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 PTPMT1Q8WUK0 201 aaPredicted RBP17.67■□□□□ 0.42
PTCD3-210ENST00000473829 NCLNQ969V3 563 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 ZNF354BQ96LW1 612 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 FAM111AQ96PZ2 611 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 MID1IP1Q9NPA3 183 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 STMN3Q9NZ72 180 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 VTI1BQ9UEU0 232 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 TEKT2Q9UIF3 430 aa17.67■□□□□ 0.42
PTCD3-210ENST00000473829 TRBV11-1A0A0K0K1C0 115 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 ARHGAP10A1A4S6 786 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 OR5H15A6NDH6 313 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 PRKNO60260 465 aaPredicted RBP17.66■□□□□ 0.42
PTCD3-210ENST00000473829 KRT6AP02538 564 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 KRT6BP04259 564 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 KRT6CP48668 564 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 TAS2R50P59544 299 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 MEP1AQ16819 746 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 LIPMQ5VYY2 423 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 SCIMPQ6UWF3 145 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 DGAT2L6Q6ZPD8 337 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 ZNF321PQ8N8H1 164 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 TCP10LQ8TDR4 215 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 ZIM3Q96PE6 472 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 MECRQ9BV79 373 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 ACPTQ9BZG2 426 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 SHCBP1LQ9BZQ2 653 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 IQCGQ9H095 443 aaKnown RBP17.66■□□□□ 0.42
PTCD3-210ENST00000473829 CDCP1Q9H5V8 836 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 ASF1BQ9NVP2 202 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 ANKRD10Q9NXR5 420 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 ADAM29Q9UKF5 820 aa17.66■□□□□ 0.42
PTCD3-210ENST00000473829 A0A1W2PS29 197 aa17.65■□□□□ 0.42
PTCD3-210ENST00000473829 TUBBP07437 444 aa17.65■□□□□ 0.42
PTCD3-210ENST00000473829 HSD3B1P14060 373 aa17.65■□□□□ 0.42
PTCD3-210ENST00000473829 HSD3B2P26439 372 aa17.65■□□□□ 0.42
PTCD3-210ENST00000473829 ALDH3A1P30838 453 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms