RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	ZBTB26	Q9HCK0	441 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	KCMF1	Q9P0J7	381 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	LRFN1	Q9P244	771 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	FETUB	Q9UGM5	382 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	DCDC2	Q9UHG0	476 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	SLC12A4	Q9UP95	1085 aa		13.83	□□□□□ -0.2
SSR4-208	ENST00000471880	C17orf105	B2RV13	164 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	PPP6C	O00743	305 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	DYRK3	O43781	588 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	DLX3	O60479	287 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	GLRA3	O75311	464 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	SLU7	O95391	586 aa	Known RBP	13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	SBK3	P0C264	359 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	MYL2	P10916	166 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	TNFRSF8	P28908	595 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	HMOX2	P30519	316 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	CD96	P40200	585 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	HNRNPH2	P55795	449 aa	Known RBP	13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	VSNL1	P62760	191 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	TNFRSF17	Q02223	184 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	CLC	Q05315	142 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	CUL3	Q13618	768 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	MAPKAPK3	Q16644	382 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	H3F3C	Q6NXT2	135 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	LETMD1	Q6P1Q0	360 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	LCA5	Q86VQ0	697 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	SLC22A9	Q8IVM8	553 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	TMEM156	Q8N614	296 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	CDYL2	Q8N8U2	506 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	NFAM1	Q8NET5	270 aa	Predicted RBP	13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	OR2W6P	Q8NHA6	318 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	OR14A16	Q8NHC5	309 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	FAR1	Q8WVX9	515 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	TMEM125	Q96AQ2	219 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	TMEM237	Q96Q45	408 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	NTMT1	Q9BV86	223 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	HES7	Q9BYE0	225 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	LIN28A	Q9H9Z2	209 aa	Known RBP	13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	FARSB	Q9NSD9	589 aa	Known RBP	13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	LYAR	Q9NX58	379 aa	Known RBP	13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	MS4A12	Q9NXJ0	267 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	AHSP	Q9NZD4	102 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	COPS7A	Q9UBW8	275 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	SNX6	Q9UNH7	406 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	ATG4B	Q9Y4P1	393 aa		13.82	□□□□□ -0.2
SSR4-208	ENST00000471880	BLACE	A4D250	179 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	FOXE1	O00358	373 aa	Predicted RBP	13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	COPE	O14579	308 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	FGF17	O60258	216 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	OR10H2	O60403	315 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	CRCP	O75575	148 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	ZFAND5	O76080	213 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	PDYN	P01213	254 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	KLK1	P06870	262 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	GSTA1	P08263	222 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	FAM58BP	P0C7Q3	252 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	NR2F6	P10588	404 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	HSD17B3	P37058	310 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	CYB561	P49447	251 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	UNC50	Q53HI1	259 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	ZNF678	Q5SXM1	525 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	CCNYL2	Q5T2Q4	361 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	FAM219B	Q5XKK7	198 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	RPUSD3	Q6P087	351 aa	Known RBP	13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	GPRIN3	Q6ZVF9	776 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	PAGE2	Q7Z2X7	111 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	C4orf33	Q8N1A6	199 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	ZCCHC7	Q8N3Z6	543 aa	Known RBP	13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	TMEM178A	Q8NBL3	297 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	FAM98A	Q8NCA5	519 aa	Known RBP	13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	DOK4	Q8TEW6	326 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	PPWD1	Q96BP3	646 aa	Known RBP	13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	RBM18	Q96H35	190 aa	Known RBP	13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	MRPL1	Q9BYD6	325 aa	Known RBP	13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	IQCG	Q9H095	443 aa	Known RBP	13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	ERVK-11	Q9UQG0	969 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	OSGIN2	Q9Y236	505 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880	TSC22D4	Q9Y3Q8	395 aa		13.81	□□□□□ -0.2
SSR4-208	ENST00000471880		A0A1B0GTL3	188 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	SYNDIG1L	A6NDD5	238 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	TMPRSS11D	O60235	418 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	ITGA10	O75578	1167 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	SCEL	O95171	688 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	CBX6	O95503	412 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	CRYAB	P02511	175 aa	Known RBP	13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	KRT6A	P02538	564 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	KRT6B	P04259	564 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	RNF224	P0DH78	156 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	BSG	P35613	385 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	CCT5	P48643	541 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	KRT6C	P48668	564 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	MLF1	P58340	268 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	PLIN5	Q00G26	463 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	FOLH1	Q04609	750 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	RASA2	Q15283	850 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	TERF2	Q15554	542 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	INA	Q16352	499 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	CFAP157	Q5JU67	520 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.8	□□□□□ -0.2

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