RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 FCHO1O14526 889 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 NME2P1O60361 137 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 LDB3O75112 727 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 SMIM24O75264 130 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 ETHE1O95571 254 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 SP1P08047 785 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 CD46P15529 392 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 NME2P22392 152 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 PTX3P26022 381 aaPredicted RBP13.1□□□□□ -0.31
COMMD3-208ENST00000470045 BSGP35613 385 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 HLCSP50747 726 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 RAP1GDS1P52306 607 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 HNRNPH2P55795 449 aaKnown RBP13.1□□□□□ -0.31
COMMD3-208ENST00000470045 TNFRSF17Q02223 184 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 OC90Q02509 493 aaPredicted RBP13.1□□□□□ -0.31
COMMD3-208ENST00000470045 SLAMF1Q13291 335 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 C10orf62Q5T681 223 aaPredicted RBP13.1□□□□□ -0.31
COMMD3-208ENST00000470045 LGSNQ5TDP6 509 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 CNPY4Q8N129 248 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 MORN4Q8NDC4 146 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 C7orf57Q8NEG2 295 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 OR14A16Q8NHC5 309 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 ZNF483Q8TF39 744 aaPredicted RBP13.1□□□□□ -0.31
COMMD3-208ENST00000470045 C5orf34Q96MH7 638 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 CDK15Q96Q40 435 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 ALOXE3Q9BYJ1 711 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 DDX31Q9H8H2 851 aaKnown RBP13.1□□□□□ -0.31
COMMD3-208ENST00000470045 KLHL1Q9NR64 748 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 PHF11Q9UIL8 331 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 FBXW2Q9UKT8 454 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 OSGIN2Q9Y236 505 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 CROCCQ5TZA2 2017 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 TMEM200CA6NKL6 621 aa13.09□□□□□ -0.31
COMMD3-208ENST00000470045 FGF17O60258 216 aa13.09□□□□□ -0.31
COMMD3-208ENST00000470045 PRKNO60260 465 aaPredicted RBP13.09□□□□□ -0.31
COMMD3-208ENST00000470045 SLC25A12O75746 678 aa13.09□□□□□ -0.31
COMMD3-208ENST00000470045 SEMA3DO95025 777 aa13.09□□□□□ -0.31
COMMD3-208ENST00000470045 CPN2P22792 545 aa13.09□□□□□ -0.31
COMMD3-208ENST00000470045 CYB561P49447 251 aa13.09□□□□□ -0.31
COMMD3-208ENST00000470045 CCNG1P51959 295 aa13.09□□□□□ -0.31
COMMD3-208ENST00000470045 KCNK10P57789 538 aa13.09□□□□□ -0.31
COMMD3-208ENST00000470045 STX4Q12846 297 aa13.09□□□□□ -0.31
COMMD3-208ENST00000470045 SLC29A2Q14542 456 aa13.09□□□□□ -0.31
COMMD3-208ENST00000470045 FRG2Q64ET8 278 aa13.09□□□□□ -0.31
COMMD3-208ENST00000470045 SLC25A25Q6KCM7 469 aa13.09□□□□□ -0.31
COMMD3-208ENST00000470045 GALNTL5Q7Z4T8 443 aa13.09□□□□□ -0.31
COMMD3-208ENST00000470045 GPR180Q86V85 440 aa13.09□□□□□ -0.31
COMMD3-208ENST00000470045 MZB1Q8WU39 189 aa13.09□□□□□ -0.31
COMMD3-208ENST00000470045 DAZLQ92904 295 aaKnown RBP13.09□□□□□ -0.31
COMMD3-208ENST00000470045 FRG2BQ96QU4 278 aa13.09□□□□□ -0.31
COMMD3-208ENST00000470045 LYARQ9NX58 379 aaKnown RBP13.09□□□□□ -0.31
COMMD3-208ENST00000470045 PLEKHB1Q9UF11 243 aaPredicted RBP13.09□□□□□ -0.31
COMMD3-208ENST00000470045 ATG4BQ9Y4P1 393 aa13.09□□□□□ -0.31
COMMD3-208ENST00000470045 CLCA3PQ9Y6N3 262 aa13.09□□□□□ -0.31
COMMD3-208ENST00000470045 DIDO1Q9BTC0 2240 aaKnown RBP13.09□□□□□ -0.31
COMMD3-208ENST00000470045 A0A1B0GTL3 188 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 TMPRSS11DO60235 418 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 EEDO75530 441 aaKnown RBP13.08□□□□□ -0.32
COMMD3-208ENST00000470045 ITGA10O75578 1167 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 ZFAND5O76080 213 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 IFNA16P05015 189 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 STT3AP46977 705 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 NEK2P51955 445 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 GFRALQ6UXV0 394 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 NUDT13Q86X67 352 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 SIAH3Q8IW03 269 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 GSPT2Q8IYD1 628 aaKnown RBP13.08□□□□□ -0.32
COMMD3-208ENST00000470045 MYRIPQ8NFW9 859 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 OR4F6Q8NGB9 312 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 OR8K3Q8NH51 312 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 ACMSDQ8TDX5 336 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 THAP3Q8WTV1 239 aaPredicted RBP13.08□□□□□ -0.32
COMMD3-208ENST00000470045 RELTQ969Z4 430 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 SERPINI1Q99574 410 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 CCDC77Q9BR77 488 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 RPF2Q9H7B2 306 aaKnown RBP13.08□□□□□ -0.32
COMMD3-208ENST00000470045 SEMA4BQ9NPR2 832 aaPredicted RBP13.08□□□□□ -0.32
COMMD3-208ENST00000470045 TMEM216Q9P0N5 145 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 PSMC3IPQ9P2W1 217 aaPredicted RBP13.08□□□□□ -0.32
COMMD3-208ENST00000470045 SEC14L3Q9UDX4 400 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 ASB4Q9Y574 426 aa13.08□□□□□ -0.32
COMMD3-208ENST00000470045 UNC79Q9P2D8 2635 aa13.07□□□□□ -0.32
COMMD3-208ENST00000470045 IQANK1A0A1B0GTG1 560 aa13.07□□□□□ -0.32
COMMD3-208ENST00000470045 MYOCOSA0A1B0GUC4 107 aa13.07□□□□□ -0.32
COMMD3-208ENST00000470045 C17orf105B2RV13 164 aa13.07□□□□□ -0.32
COMMD3-208ENST00000470045 LRRTM2O43300 516 aa13.07□□□□□ -0.32
COMMD3-208ENST00000470045 PROM1O43490 865 aa13.07□□□□□ -0.32
COMMD3-208ENST00000470045 WISP2O76076 250 aa13.07□□□□□ -0.32
COMMD3-208ENST00000470045 UNC5CO95185 931 aa13.07□□□□□ -0.32
COMMD3-208ENST00000470045 OTCP00480 354 aa13.07□□□□□ -0.32
COMMD3-208ENST00000470045 FAM58BPP0C7Q3 252 aa13.07□□□□□ -0.32
COMMD3-208ENST00000470045 TNFRSF8P28908 595 aa13.07□□□□□ -0.32
COMMD3-208ENST00000470045 BUD31P41223 144 aaPredicted RBP13.07□□□□□ -0.32
COMMD3-208ENST00000470045 HERVK_113P63132 956 aa13.07□□□□□ -0.32
COMMD3-208ENST00000470045 ID2Q02363 134 aa13.07□□□□□ -0.32
COMMD3-208ENST00000470045 FOLH1Q04609 750 aa13.07□□□□□ -0.32
COMMD3-208ENST00000470045 SRSF11Q05519 484 aaKnown RBP13.07□□□□□ -0.32
COMMD3-208ENST00000470045 BIKQ13323 160 aa13.07□□□□□ -0.32
COMMD3-208ENST00000470045 C18orf63Q68DL7 685 aa13.07□□□□□ -0.32
COMMD3-208ENST00000470045 LETMD1Q6P1Q0 360 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms