RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 LOC110117498-PIK3R3F6TDL0 507 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 GPX5O75715 221 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 CXCL14O95715 111 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 SCG5P05408 212 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 CISD3P0C7P0 127 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 ERGP11308 486 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 DDX5P17844 614 aaKnown RBP13□□□□□ -0.33
BRCA1-209ENST00000470026 DDCP20711 480 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 GTF2E2P29084 291 aaKnown RBP13□□□□□ -0.33
BRCA1-209ENST00000470026 SOAT1P35610 550 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 SOX6P35712 828 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 CYP4F2P78329 520 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 CEACAM20Q6UY09 585 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 ADGRF3Q8IZF5 1079 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 HORMAD2Q8N7B1 307 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 IL17RCQ8NAC3 791 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 SLC38A5Q8WUX1 472 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 PIK3R3Q92569 461 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 HTRA1Q92743 480 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 ZNF764Q96H86 408 aaPredicted RBP13□□□□□ -0.33
BRCA1-209ENST00000470026 ZNF514Q96K75 400 aaPredicted RBP13□□□□□ -0.33
BRCA1-209ENST00000470026 DEFB118Q96PH6 123 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 CCDC32Q9BV29 185 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 OR2AG1Q9H205 316 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 C3orf14Q9HBI5 128 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 HHATLQ9HCP6 504 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 ACAD8Q9UKU7 415 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 MGAT4BQ9UQ53 548 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 NOTCH4Q99466 2003 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 K7ESM1 405 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 KMOO15229 486 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 SEPHS1P49903 392 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 MNX1P50219 401 aaPredicted RBP12.99□□□□□ -0.33
BRCA1-209ENST00000470026 DPTQ07507 201 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 POM121L1PQ3SYA9 428 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 PRAMEF14Q5SWL7 426 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 ATAD3BQ5T9A4 648 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 PRAMEF13Q5VWM6 474 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 TCTN3Q6NUS6 607 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 GDPGP1Q6ZNW5 385 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 GDPD3Q7L5L3 318 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 TRAPPC5Q8IUR0 188 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 GALNT6Q8NCL4 622 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 OR2L2Q8NH16 312 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 SORBS1Q9BX66 1292 aaKnown RBP12.99□□□□□ -0.33
BRCA1-209ENST00000470026 UCK2Q9BZX2 261 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 MIEF1Q9NQG6 463 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 DYRK4Q9NR20 520 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 RHCGQ9UBD6 479 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 GPR34Q9UPC5 381 aa12.99□□□□□ -0.33
BRCA1-209ENST00000470026 TLR4O00206 839 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 PLPP1O14494 284 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 SNPHO15079 494 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 ENTPD6O75354 484 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 SLITRK5O94991 958 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 HSMCR30P0CW71 290 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 ELAVL4P26378 380 aaKnown RBP12.98□□□□□ -0.33
BRCA1-209ENST00000470026 CSTF2P33240 577 aaKnown RBP eCLIP12.98□□□□□ -0.33
BRCA1-209ENST00000470026 CA8P35219 290 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 HOXD12P35452 270 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 OPRD1P41143 372 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 DGKGP49619 791 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 PCBP4P57723 403 aaKnown RBP12.98□□□□□ -0.33
BRCA1-209ENST00000470026 NCF4Q15080 339 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 MED22Q15528 200 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 LRIT3Q3SXY7 679 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 ARHGAP15Q53QZ3 475 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 DEPDC1Q5TB30 811 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 C1orf53Q5VUE5 145 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 DESI1Q6ICB0 168 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 C11orf96Q7Z7L8 435 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 HEATR4Q86WZ0 1026 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 KRT78Q8N1N4 520 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 WDR36Q8NI36 951 aaKnown RBP12.98□□□□□ -0.33
BRCA1-209ENST00000470026 TM4SF18Q96CE8 201 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 CTRCQ99895 268 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 OR52A5Q9H2C5 316 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 PRM3Q9NNZ6 103 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 SIRT3Q9NTG7 399 aaPredicted RBP12.98□□□□□ -0.33
BRCA1-209ENST00000470026 AHSPQ9NZD4 102 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 IRAK3Q9Y616 596 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 WNT6Q9Y6F9 365 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 PTPRSQ13332 1948 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 FAAHO00519 579 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 B4GALT2O60909 372 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 PDE9AO76083 593 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 DLGAP3O95886 979 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 BSGP35613 385 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 TSTA3Q13630 321 aaPredicted RBP12.98□□□□□ -0.33
BRCA1-209ENST00000470026 SEC23BQ15437 767 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 RPS26P11Q5JNZ5 115 aaPredicted RBP12.98□□□□□ -0.33
BRCA1-209ENST00000470026 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.98□□□□□ -0.33
BRCA1-209ENST00000470026 AKAP14Q86UN6 197 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 TAGAPQ8N103 731 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 NUS1Q96E22 293 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 TMEM19Q96HH6 336 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 NEUROD4Q9HD90 331 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 FBXL12Q9NXK8 326 aa12.98□□□□□ -0.33
BRCA1-209ENST00000470026 CRNNQ9UBG3 495 aaPredicted RBP12.98□□□□□ -0.33
BRCA1-209ENST00000470026 FAM227AF5H4B4 570 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms