RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 CHSY3Q70JA7 882 aa15.14■□□□□ 0.01
COL9A3-208ENST00000469802 RNF175Q8N4F7 328 aa15.14■□□□□ 0.01
COL9A3-208ENST00000469802 TEX9Q8N6V9 391 aa15.14■□□□□ 0.01
COL9A3-208ENST00000469802 ZNF321PQ8N8H1 164 aa15.14■□□□□ 0.01
COL9A3-208ENST00000469802 PSD4Q8NDX1 1056 aa15.14■□□□□ 0.01
COL9A3-208ENST00000469802 SLC2A12Q8TD20 617 aa15.14■□□□□ 0.01
COL9A3-208ENST00000469802 PHF10Q8WUB8 498 aaKnown RBP15.14■□□□□ 0.01
COL9A3-208ENST00000469802 ISL2Q96A47 359 aa15.14■□□□□ 0.01
COL9A3-208ENST00000469802 PHF12Q96QT6 1004 aa15.14■□□□□ 0.01
COL9A3-208ENST00000469802 SORBS1Q9BX66 1292 aaKnown RBP15.14■□□□□ 0.01
COL9A3-208ENST00000469802 ZNF717Q9BY31 904 aaPredicted RBP15.14■□□□□ 0.01
COL9A3-208ENST00000469802 OR51B5Q9H339 312 aa15.14■□□□□ 0.01
COL9A3-208ENST00000469802 DEPPQ9NTK1 212 aa15.14■□□□□ 0.01
COL9A3-208ENST00000469802 SPACA6W5XKT8 324 aa15.14■□□□□ 0.01
COL9A3-208ENST00000469802 DCHS2Q6V1P9 2916 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 MYOCOSA0A1B0GUC4 107 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 C17orf105B2RV13 164 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 H0YIV9 168 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 SAP18O00422 153 aaKnown RBP15.13■□□□□ 0.01
COL9A3-208ENST00000469802 PLPP1O14494 284 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 ADAM10O14672 748 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 TFECO14948 347 aaPredicted RBP15.13■□□□□ 0.01
COL9A3-208ENST00000469802 FGF17O60258 216 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 UGDHO60701 494 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 SH3BGRLO75368 114 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 OR6B1O95007 311 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 TUBB4AP04350 444 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 ESRRAP11474 423 aaPredicted RBP15.13■□□□□ 0.01
COL9A3-208ENST00000469802 GFAPP14136 432 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 ABOP16442 354 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 HTR1EP28566 365 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 RFC3P40938 356 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 SOX3P41225 446 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 GPR85P60893 370 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 CDSNQ15517 529 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 PFKFB4Q16877 469 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 TECRLQ5HYJ1 363 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 LIPJQ5W064 366 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 OR4C11Q6IEV9 310 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 METTL2BQ6P1Q9 378 aaKnown RBP15.13■□□□□ 0.01
COL9A3-208ENST00000469802 DOLPP1Q86YN1 238 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 ZCCHC7Q8N3Z6 543 aaKnown RBP15.13■□□□□ 0.01
COL9A3-208ENST00000469802 ZNF721Q8TF20 911 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 AGAP11Q8TF27 550 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 DMRTA2Q96SC8 542 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 OR8D2Q9GZM6 311 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 LIN28AQ9H9Z2 209 aaKnown RBP15.13■□□□□ 0.01
COL9A3-208ENST00000469802 TIMMDC1Q9NPL8 285 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 NCKAP5O14513 1909 aa15.13■□□□□ 0.01
COL9A3-208ENST00000469802 LRRC14BA6NHZ5 514 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 A8MVJ9 347 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 E9PLN8 166 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 ZNF354AO60765 605 aaPredicted RBP15.12■□□□□ 0.01
COL9A3-208ENST00000469802 ETHE1O95571 254 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 IGKV3-11P04433 115 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 CPN2P22792 545 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 PHBP35232 272 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 STT3AP46977 705 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 SMSP52788 366 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 RNF4P78317 190 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 TNFRSF17Q02223 184 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 ID2Q02363 134 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 DDX39BQ13838 428 aaKnown RBP15.12■□□□□ 0.01
COL9A3-208ENST00000469802 WHAMMP3Q1A5X7 153 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 NCCRP1Q6ZVX7 275 aaPredicted RBP15.12■□□□□ 0.01
COL9A3-208ENST00000469802 GOLGA7Q7Z5G4 137 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 L3MBTL4Q8NA19 623 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 C7orf57Q8NEG2 295 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 ASB15Q8WXK1 588 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 RGMAQ96B86 450 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 MRRFQ96E11 262 aaKnown RBP15.12■□□□□ 0.01
COL9A3-208ENST00000469802 C16orf45Q96MC5 204 aaPredicted RBP15.12■□□□□ 0.01
COL9A3-208ENST00000469802 MTERF1Q99551 399 aaKnown RBP15.12■□□□□ 0.01
COL9A3-208ENST00000469802 VKORC1Q9BQB6 163 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 CDC42EP4Q9H3Q1 356 aaKnown RBP15.12■□□□□ 0.01
COL9A3-208ENST00000469802 CHST11Q9NPF2 352 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 HPF1Q9NWY4 346 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 MS4A12Q9NXJ0 267 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 PPT2Q9UMR5 302 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 PCDHGA11Q9Y5H2 935 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 PDZD2O15018 2839 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 HCFC1P51610 2035 aa15.12■□□□□ 0.01
COL9A3-208ENST00000469802 A0A0A6YYD5 115 aa15.11■□□□□ 0.01
COL9A3-208ENST00000469802 A0A0G2JMM0 328 aa15.11■□□□□ 0.01
COL9A3-208ENST00000469802 A0A1W2PPB8 328 aa15.11■□□□□ 0.01
COL9A3-208ENST00000469802 A0A1W2PRS3 328 aa15.11■□□□□ 0.01
COL9A3-208ENST00000469802 KIR3DP1A8MWS1 328 aa15.11■□□□□ 0.01
COL9A3-208ENST00000469802 WWP2O00308 870 aa15.11■□□□□ 0.01
COL9A3-208ENST00000469802 HS6ST1O60243 411 aa15.11■□□□□ 0.01
COL9A3-208ENST00000469802 SIX3O95343 332 aaPredicted RBP15.11■□□□□ 0.01
COL9A3-208ENST00000469802 TYK2P29597 1187 aa15.11■□□□□ 0.01
COL9A3-208ENST00000469802 ECHS1P30084 290 aa15.11■□□□□ 0.01
COL9A3-208ENST00000469802 PIK3CGP48736 1102 aa15.11■□□□□ 0.01
COL9A3-208ENST00000469802 HNRNPH2P55795 449 aaKnown RBP15.11■□□□□ 0.01
COL9A3-208ENST00000469802 RPS13P62277 151 aaKnown RBP15.11■□□□□ 0.01
COL9A3-208ENST00000469802 SLAMF1Q13291 335 aa15.11■□□□□ 0.01
COL9A3-208ENST00000469802 GTF2H2Q13888 395 aa15.11■□□□□ 0.01
COL9A3-208ENST00000469802 UAP1Q16222 522 aaPredicted RBP15.11■□□□□ 0.01
COL9A3-208ENST00000469802 MRM1Q6IN84 353 aaKnown RBP15.11■□□□□ 0.01
COL9A3-208ENST00000469802 GTF2H2CQ6P1K8 395 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms