RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-210	ENST00000469565	NAV2	Q8IVL1	2488 aa		12.85	□□□□□ -0.35
LMNA-210	ENST00000469565	IGLV3-12	A0A075B6K2	115 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	MYOCOS	A0A1B0GUC4	107 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565		A0A1W2PR48	441 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	GLOD5	A6NK44	160 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	IDS	B3KWA1	339 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	SDHD	O14521	159 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	TERT	O14746	1132 aa	Known RBP	12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	PROM1	O43490	865 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	SLC28A2	O43868	658 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	PRMT3	O60678	531 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	VPS4B	O75351	444 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	PRKRA	O75569	313 aa	Known RBP	12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	KLF7	O75840	302 aa	Predicted RBP	12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	PRKAR1A	P10644	381 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	MAPK1	P28482	360 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	EPHA3	P29320	983 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	TAS2R50	P59544	299 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	BTG2	P78543	158 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	TNFRSF17	Q02223	184 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	SLC13A2	Q13183	592 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	SSPN	Q14714	243 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	KIAA0040	Q15053	153 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	SLC9B1	Q4ZJI4	515 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	C6orf136	Q5SQH8	315 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	CLNK	Q7Z7G1	428 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	ZSCAN1	Q8NBB4	408 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	C16orf78	Q8WTQ4	265 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	METTL21A	Q8WXB1	218 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	UCN3	Q969E3	161 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	TM4SF18	Q96CE8	201 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	METTL2A	Q96IZ6	378 aa	Known RBP	12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	PTCHD1	Q96NR3	888 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	FAIM2	Q9BWQ8	316 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	VN1R1	Q9GZP7	353 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	RPF2	Q9H7B2	306 aa	Known RBP	12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	NPHS2	Q9NP85	383 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	LANCL2	Q9NS86	450 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	FGFR1OP2	Q9NVK5	253 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	TEX10	Q9NXF1	929 aa	Predicted RBP	12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	DCTN4	Q9UJW0	460 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	EIF3L	Q9Y262	564 aa	Known RBP	12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	DLGAP4	Q9Y2H0	992 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	PCDHGA6	Q9Y5G7	932 aa		12.84	□□□□□ -0.35
LMNA-210	ENST00000469565	MGA	Q8IWI9	3026 aa		12.83	□□□□□ -0.35
LMNA-210	ENST00000469565	CDC14C	A4D256	554 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	NPIPB8	E9PQR5	432 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	CYR61	O00622	381 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	LDB3	O75112	727 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	AIFM1	O95831	613 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	UMOD	P07911	640 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	IL3	P08700	152 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	TROVE2	P10155	538 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	NR2F6	P10588	404 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	LBP	P18428	481 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	WT1	P19544	449 aa	Predicted RBP	12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	MAOA	P21397	527 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	HNRNPF	P52597	415 aa	Known RBP	12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	AQP5	P55064	265 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	TRA2B	P62995	288 aa	Known RBP	12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	GNGT1	P63211	74 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	ID2	Q02363	134 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	ZNF763	Q0D2J5	394 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	C2orf80	Q0P641	193 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	MAD2L1	Q13257	205 aa	Predicted RBP	12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	NDUFAF5	Q5TEU4	345 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	IL23R	Q5VWK5	629 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	CCDC81	Q6ZN84	652 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	ACAD11	Q709F0	780 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	MAVS	Q7Z434	540 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	OR4N5	Q8IXE1	308 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	LRRC34	Q8IZ02	419 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	MMP21	Q8N119	569 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	TMEM132C	Q8N3T6	1108 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	LIX1	Q8N485	282 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	TMEM52	Q8NDY8	209 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	CLHC1	Q8NHS4	586 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	GFM2	Q969S9	779 aa	Known RBP	12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	SLC45A3	Q96JT2	553 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	TSSK3	Q96PN8	268 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	TRIM55	Q9BYV6	548 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	CCDC134	Q9H6E4	229 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	SEMA3G	Q9NS98	782 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	SIRT5	Q9NXA8	310 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	BAIAP2L1	Q9UHR4	511 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	G3BP2	Q9UN86	482 aa	Known RBP	12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	TMED5	Q9Y3A6	229 aa		12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	NUP214	P35658	2090 aa	Predicted RBP	12.83	□□□□□ -0.36
LMNA-210	ENST00000469565	MED13	Q9UHV7	2174 aa		12.82	□□□□□ -0.36
LMNA-210	ENST00000469565	WASHC1	A8K0Z3	465 aa		12.82	□□□□□ -0.36
LMNA-210	ENST00000469565	ZNF891	A8MT65	544 aa	Predicted RBP	12.82	□□□□□ -0.36
LMNA-210	ENST00000469565	NKX2-8	O15522	239 aa		12.82	□□□□□ -0.36
LMNA-210	ENST00000469565	EFS	O43281	561 aa		12.82	□□□□□ -0.36
LMNA-210	ENST00000469565	AKAP10	O43572	662 aa		12.82	□□□□□ -0.36
LMNA-210	ENST00000469565	ALOX12B	O75342	701 aa		12.82	□□□□□ -0.36
LMNA-210	ENST00000469565	LRAT	O95237	230 aa		12.82	□□□□□ -0.36
LMNA-210	ENST00000469565	TGDS	O95455	350 aa		12.82	□□□□□ -0.36
LMNA-210	ENST00000469565	IGHE	P01854	428 aa		12.82	□□□□□ -0.36
LMNA-210	ENST00000469565	MC1R	Q01726	317 aa		12.82	□□□□□ -0.36
LMNA-210	ENST00000469565	RHAG	Q02094	409 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms