RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.53□□□□□ -0.88
NUP50-214ENST00000469163 SLC25A13Q9UJS0 675 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 ING4Q9UNL4 249 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 FKBP7Q9Y680 259 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 KCNMB2Q9Y691 235 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 SYNDIG1LA6NDD5 238 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 LRRC37A2A6NM11 1700 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 ZNF729A6NN14 1252 aaPredicted RBP9.53□□□□□ -0.88
NUP50-214ENST00000469163 H7C0S8 307 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 MATN3O15232 486 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 SLC31A2O15432 143 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 VEGFDO43915 354 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 AIREO43918 545 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 AHSGP02765 367 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 PFKFB4Q16877 469 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 ARSIQ5FYB1 569 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 PRAMEF14Q5SWL7 426 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 PTRHD1Q6GMV3 140 aaKnown RBP9.53□□□□□ -0.88
NUP50-214ENST00000469163 PRMT9Q6P2P2 845 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 GK5Q6ZS86 529 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 USP53Q70EK8 1073 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 ZZZ3Q8IYH5 903 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 VWA5B2Q8N398 1253 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 ACVR1CQ8NER5 493 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 SCAMP4Q969E2 229 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 FCRL3Q96P31 734 aaPredicted RBP9.53□□□□□ -0.88
NUP50-214ENST00000469163 CDCP1Q9H5V8 836 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 IL1RL2Q9HB29 575 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 LTB4R2Q9NPC1 389 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 USE1Q9NZ43 259 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 DEC1Q9P2X7 70 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 FKBPLQ9UIM3 349 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 OSGIN1Q9UJX0 560 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 PKP3Q9Y446 797 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 MGAMO43451 1857 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 RPS10-NUDT3A0A1W2PQS6 291 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 WASHC1A8K0Z3 465 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 CLDN4O14493 209 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 GPR171O14626 319 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 ABCD4O14678 606 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 LDLRAD4O15165 306 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 FABP7O15540 132 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 CLDN11O75508 207 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 SRP72O76094 671 aaKnown RBP9.53□□□□□ -0.88
NUP50-214ENST00000469163 CLDN7O95471 211 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 IFNA4P05014 189 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 NUDT7P0C024 238 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 CDH13P55290 713 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 DCDC1P59894 354 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 UAP1L1Q3KQV9 507 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 ZNF789Q5FWF6 425 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 MBLAC2Q68D91 279 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 GPR139Q6DWJ6 353 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 SLC27A4Q6P1M0 643 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 CNSTQ6PJW8 725 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 RFLNAQ6ZTI6 216 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 GALNT10Q86SR1 603 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 FRMD1Q8N878 549 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 LMNTD1Q8N9Z9 388 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 HJURPQ8NCD3 748 aaPredicted RBP9.53□□□□□ -0.88
NUP50-214ENST00000469163 CENPIQ92674 756 aaPredicted RBP9.53□□□□□ -0.88
NUP50-214ENST00000469163 VWCEQ96DN2 955 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 CERS2Q96G23 380 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 GSX2Q9BZM3 304 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 IL1RAPQ9NPH3 570 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 SEC14L4Q9UDX3 406 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 SSR3Q9UNL2 185 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 LYVE1Q9Y5Y7 322 aa9.53□□□□□ -0.88
NUP50-214ENST00000469163 TCRBV16S1A1N1A0A5B0 115 aa9.52□□□□□ -0.88
NUP50-214ENST00000469163 BCLAF3A2AJT9 711 aaKnown RBP9.52□□□□□ -0.88
NUP50-214ENST00000469163 HEPACAM2A8MVW5 462 aa9.52□□□□□ -0.88
NUP50-214ENST00000469163 DNASE2O00115 360 aaPredicted RBP9.52□□□□□ -0.88
NUP50-214ENST00000469163 STX16O14662 325 aa9.52□□□□□ -0.88
NUP50-214ENST00000469163 RBBP9O75884 186 aa9.52□□□□□ -0.88
NUP50-214ENST00000469163 ATP6V1B2P21281 511 aa9.52□□□□□ -0.88
NUP50-214ENST00000469163 RGS19P49795 217 aa9.52□□□□□ -0.88
NUP50-214ENST00000469163 CLCNKAP51800 687 aa9.52□□□□□ -0.88
NUP50-214ENST00000469163 TAS2R60P59551 318 aa9.52□□□□□ -0.88
NUP50-214ENST00000469163 USF2Q15853 346 aaPredicted RBP9.52□□□□□ -0.88
NUP50-214ENST00000469163 HKDC1Q2TB90 917 aa9.52□□□□□ -0.88
NUP50-214ENST00000469163 ZNF284Q2VY69 593 aa9.52□□□□□ -0.88
NUP50-214ENST00000469163 TANGO2Q6ICL3 276 aa9.52□□□□□ -0.88
NUP50-214ENST00000469163 PAQR7Q86WK9 346 aa9.52□□□□□ -0.88
NUP50-214ENST00000469163 LIX1LQ8IVB5 337 aa9.52□□□□□ -0.88
NUP50-214ENST00000469163 KBTBD8Q8NFY9 601 aa9.52□□□□□ -0.88
NUP50-214ENST00000469163 WFIKKN2Q8TEU8 576 aa9.52□□□□□ -0.88
NUP50-214ENST00000469163 ZNF419Q96HQ0 510 aaPredicted RBP9.52□□□□□ -0.88
NUP50-214ENST00000469163 UHRF1Q96T88 793 aaPredicted RBP9.52□□□□□ -0.88
NUP50-214ENST00000469163 ACOX2Q99424 681 aa9.52□□□□□ -0.88
NUP50-214ENST00000469163 SEPHS2Q99611 448 aa9.52□□□□□ -0.88
NUP50-214ENST00000469163 MAB21L2Q9Y586 359 aa9.52□□□□□ -0.88
NUP50-214ENST00000469163 A0A1W2PQ09 198 aa9.52□□□□□ -0.89
NUP50-214ENST00000469163 SLC28A1O00337 649 aa9.52□□□□□ -0.89
NUP50-214ENST00000469163 SLC31A1O15431 190 aa9.52□□□□□ -0.89
NUP50-214ENST00000469163 LATO43561 262 aa9.52□□□□□ -0.89
NUP50-214ENST00000469163 FGF3P11487 239 aaPredicted RBP9.52□□□□□ -0.89
NUP50-214ENST00000469163 LAP3P28838 519 aa9.52□□□□□ -0.89
NUP50-214ENST00000469163 RFC2P35250 354 aa9.52□□□□□ -0.89
NUP50-214ENST00000469163 PSMD8P48556 350 aa9.52□□□□□ -0.89
NUP50-214ENST00000469163 DGKGP49619 791 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms