RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 LRRC70Q7Z2Q7 622 aa19.52■□□□□ 0.72
COL9A3-207ENST00000467819 CDH24Q86UP0 819 aa19.52■□□□□ 0.72
COL9A3-207ENST00000467819 SLC22A16Q86VW1 577 aa19.52■□□□□ 0.72
COL9A3-207ENST00000467819 CCDC71Q8IV32 467 aaPredicted RBP19.52■□□□□ 0.72
COL9A3-207ENST00000467819 CTAGE3PQ8IX95 158 aa19.52■□□□□ 0.72
COL9A3-207ENST00000467819 SRFBP1Q8NEF9 429 aaKnown RBP19.52■□□□□ 0.72
COL9A3-207ENST00000467819 OR5M9Q8NGP3 310 aa19.52■□□□□ 0.72
COL9A3-207ENST00000467819 ZNF473Q8WTR7 871 aaKnown RBP19.52■□□□□ 0.72
COL9A3-207ENST00000467819 TBCDQ9BTW9 1192 aa19.52■□□□□ 0.72
COL9A3-207ENST00000467819 UCK2Q9BZX2 261 aa19.52■□□□□ 0.72
COL9A3-207ENST00000467819 ALG9Q9H6U8 611 aa19.52■□□□□ 0.72
COL9A3-207ENST00000467819 ZDHHC11Q9H8X9 412 aa19.52■□□□□ 0.72
COL9A3-207ENST00000467819 MCCC2Q9HCC0 563 aa19.52■□□□□ 0.72
COL9A3-207ENST00000467819 LIPGQ9Y5X9 500 aa19.52■□□□□ 0.72
COL9A3-207ENST00000467819 SPACA6W5XKT8 324 aa19.52■□□□□ 0.72
COL9A3-207ENST00000467819 SPG11Q96JI7 2443 aa19.51■□□□□ 0.71
COL9A3-207ENST00000467819 FAM159BA6NKW6 160 aa19.51■□□□□ 0.71
COL9A3-207ENST00000467819 SAP18O00422 153 aaKnown RBP19.51■□□□□ 0.71
COL9A3-207ENST00000467819 ZNF354AO60765 605 aaPredicted RBP19.51■□□□□ 0.71
COL9A3-207ENST00000467819 TGFB1P01137 390 aa19.51■□□□□ 0.71
COL9A3-207ENST00000467819 CAPN3P20807 821 aa19.51■□□□□ 0.71
COL9A3-207ENST00000467819 SSR2P43308 183 aa19.51■□□□□ 0.71
COL9A3-207ENST00000467819 NUP107P57740 925 aa19.51■□□□□ 0.71
COL9A3-207ENST00000467819 PMPCAQ10713 525 aa19.51■□□□□ 0.71
COL9A3-207ENST00000467819 TBCCQ15814 346 aa19.51■□□□□ 0.71
COL9A3-207ENST00000467819 RAPH1Q70E73 1250 aa19.51■□□□□ 0.71
COL9A3-207ENST00000467819 OR5M3Q8NGP4 307 aa19.51■□□□□ 0.71
COL9A3-207ENST00000467819 LILRB4Q8NHJ6 448 aa19.51■□□□□ 0.71
COL9A3-207ENST00000467819 UBXN10Q96LJ8 280 aa19.51■□□□□ 0.71
COL9A3-207ENST00000467819 TREX2Q9BQ50 279 aaPredicted RBP19.51■□□□□ 0.71
COL9A3-207ENST00000467819 FAM173AQ9BQD7 235 aa19.51■□□□□ 0.71
COL9A3-207ENST00000467819 NPDC1Q9NQX5 325 aaPredicted RBP19.51■□□□□ 0.71
COL9A3-207ENST00000467819 PNPLA3Q9NST1 481 aa19.51■□□□□ 0.71
COL9A3-207ENST00000467819 WHRNQ9P202 907 aa19.51■□□□□ 0.71
COL9A3-207ENST00000467819 COPS7AQ9UBW8 275 aa19.51■□□□□ 0.71
COL9A3-207ENST00000467819 NINQ8N4C6 2090 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 ARHGAP21Q5T5U3 1957 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 SUPT3HB4E1H0 165 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 FANCGO15287 622 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 EIF3HO15372 352 aaKnown RBP eCLIP19.5■□□□□ 0.713e-14■□□□□ 9.9
COL9A3-207ENST00000467819 SUPT3HO75486 399 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 FAM155BO75949 473 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 ETHE1O95571 254 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 FREM3P0C091 2139 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 CNR1P21554 472 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 HIST1H1TP22492 207 aaPredicted RBP19.5■□□□□ 0.71
COL9A3-207ENST00000467819 CPN2P22792 545 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 MAGEA5P43359 124 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 DNASE1L1P49184 302 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 SLMAPQ14BN4 828 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 AP5B1Q2VPB7 878 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 MED27Q6P2C8 311 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 RGS9BPQ6ZS82 235 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 C3orf62Q6ZUJ4 267 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 FAM47EQ6ZV65 393 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 CMC1Q7Z7K0 106 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 OR4N5Q8IXE1 308 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 OR5L2Q8NGL0 311 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 OR8K3Q8NH51 312 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 UBE2E3Q969T4 207 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 ANKRD9Q96BM1 317 aaPredicted RBP19.5■□□□□ 0.71
COL9A3-207ENST00000467819 SMC6Q96SB8 1091 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 ERP44Q9BS26 406 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 SORBS1Q9BX66 1292 aaKnown RBP19.5■□□□□ 0.71
COL9A3-207ENST00000467819 PHACTR1Q9C0D0 580 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 NUDT4Q9NZJ9 180 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 RNF14Q9UBS8 474 aa19.5■□□□□ 0.71
COL9A3-207ENST00000467819 FAM187AA6NFU0 413 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 UBXN8O00124 270 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 FGF17O60258 216 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 GLSO94925 669 aaPredicted RBP19.49■□□□□ 0.71
COL9A3-207ENST00000467819 C1QAP02745 245 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 COX7A2P14406 83 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 SPRP35270 261 aaPredicted RBP19.49■□□□□ 0.71
COL9A3-207ENST00000467819 CASP2P42575 452 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 GPX6P59796 221 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 DLG1Q12959 904 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 DDX39BQ13838 428 aaKnown RBP19.49■□□□□ 0.71
COL9A3-207ENST00000467819 GXYLT1Q4G148 440 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 TMEM35AQ53FP2 167 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 NDUFAF5Q5TEU4 345 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 ZNF585AQ6P3V2 769 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 OPN5Q6U736 354 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 CHSY3Q70JA7 882 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 RNF175Q8N4F7 328 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 TMEM251Q8N6I4 163 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 PPM1NQ8N819 430 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 GOLM1Q8NBJ4 401 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 STAG3L4Q8TBR4 150 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 ZNF721Q8TF20 911 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 DGAT2Q96PD7 388 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 OR51B5Q9H339 312 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 KCNJ16Q9NPI9 418 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 SACM1LQ9NTJ5 587 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 OPTCQ9UBM4 332 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 TNFRSF10DQ9UBN6 386 aa19.49■□□□□ 0.71
COL9A3-207ENST00000467819 K7EPI3 171 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 RAD51CO43502 376 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 TOXO94900 526 aa19.48■□□□□ 0.71
COL9A3-207ENST00000467819 SCELO95171 688 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms