RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 EFCAB1Q9HAE3 211 aa11.4□□□□□ -0.58
CTNS-205ENST00000467663 SLC22A11Q9NSA0 550 aa11.4□□□□□ -0.58
CTNS-205ENST00000467663 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.4□□□□□ -0.58
CTNS-205ENST00000467663 ARMCX1Q9P291 453 aa11.4□□□□□ -0.58
CTNS-205ENST00000467663 NDOR1Q9UHB4 597 aa11.4□□□□□ -0.58
CTNS-205ENST00000467663 MCM8Q9UJA3 840 aa11.4□□□□□ -0.58
CTNS-205ENST00000467663 NDUFAF1Q9Y375 327 aa11.4□□□□□ -0.58
CTNS-205ENST00000467663 PTRH2Q9Y3E5 179 aaKnown RBP11.4□□□□□ -0.58
CTNS-205ENST00000467663 PCDHGB7Q9Y5F8 929 aa11.4□□□□□ -0.58
CTNS-205ENST00000467663 PTGDR2Q9Y5Y4 395 aa11.4□□□□□ -0.58
CTNS-205ENST00000467663 MYO18BQ8IUG5 2567 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 DSCR3O14972 297 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 ALBP02768 609 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 IL6P05231 212 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 ITGAXP20702 1163 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 PRPS1L1P21108 318 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 ALAS2P22557 587 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 TIA1P31483 386 aaKnown RBP eCLIP11.39□□□□□ -0.59
CTNS-205ENST00000467663 FOLR3P41439 243 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 PGDP52209 483 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 RAP1GDS1P52306 607 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 RRADP55042 308 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 KCNK10P57789 538 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 SKP1P63208 163 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 TBL3Q12788 808 aaKnown RBP11.39□□□□□ -0.59
CTNS-205ENST00000467663 ATP1A4Q13733 1029 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 GRM7Q14831 915 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 DNAL1Q4LDG9 190 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 AGKQ53H12 422 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 MSANTD1Q6ZTZ1 278 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 TTLL10Q6ZVT0 673 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 IKBIPQ70UQ0 350 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 RNF44Q7L0R7 432 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 OVCH1Q7RTY7 1134 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 MRGPREQ86SM8 312 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 TREML1Q86YW5 311 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 ARHGAP24Q8N264 748 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 ANKRD53Q8N9V6 530 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 CREB3L4Q8TEY5 395 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 RERGQ96A58 199 aaPredicted RBP11.39□□□□□ -0.59
CTNS-205ENST00000467663 FKBP10Q96AY3 582 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 TESCQ96BS2 214 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 TM4SF19Q96DZ7 209 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 MTERF3Q96E29 417 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 APIPQ96GX9 242 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 HBEGFQ99075 208 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 PRPF18Q99633 342 aaKnown RBP11.39□□□□□ -0.59
CTNS-205ENST00000467663 TBCDQ9BTW9 1192 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 DPY30Q9C005 99 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 SPNS1Q9H2V7 528 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 CUTCQ9NTM9 273 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 ARL8BQ9NVJ2 186 aa11.39□□□□□ -0.59
CTNS-205ENST00000467663 ARHGAP10A1A4S6 786 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 LRIT2A6NDA9 550 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 CFAP73A6NFT4 308 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 HAT1O14929 419 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 CFLARO15519 480 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 LCMT2O60294 686 aaKnown RBP11.38□□□□□ -0.59
CTNS-205ENST00000467663 NRP2O60462 931 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 TGFB1P01137 390 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 IGHEP01854 428 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 UMODP07911 640 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 KRT16P08779 473 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 T-ENOLP0DO92 83 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 PIM1P11309 404 aaPredicted RBP11.38□□□□□ -0.59
CTNS-205ENST00000467663 G6PDP11413 515 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 BCKDHAP12694 445 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 OTX2P32243 289 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 BCL6P41182 706 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 EMP3P54852 163 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 DIO3P55073 304 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 YBX1P67809 324 aaKnown RBP11.38□□□□□ -0.59
CTNS-205ENST00000467663 MEF2AQ02078 507 aaPredicted RBP11.38□□□□□ -0.59
CTNS-205ENST00000467663 SRSF11Q05519 484 aaKnown RBP11.38□□□□□ -0.59
CTNS-205ENST00000467663 ZNF763Q0D2J5 394 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 RCAN2Q14206 197 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 SLC9A5Q14940 896 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 FAM214AQ32MH5 1076 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 COLEC12Q5KU26 742 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 WASHC2DQ5SRD0 308 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 FRMPD2BQ6IN97 320 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 FBXO42Q6P3S6 717 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 TRIM40Q6P9F5 258 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 BLOC1S3Q6QNY0 202 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 HACD2Q6Y1H2 254 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 VN1R5Q7Z5H4 357 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 R3HCC1LQ7Z5L2 792 aaKnown RBP11.38□□□□□ -0.59
CTNS-205ENST00000467663 ASPGQ86U10 573 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 NUDT13Q86X67 352 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 HPS6Q86YV9 775 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 LIX1Q8N485 282 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 TTC29Q8NA56 475 aaPredicted RBP11.38□□□□□ -0.59
CTNS-205ENST00000467663 ZNF740Q8NDX6 193 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 FDCSPQ8NFU4 85 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 SLC13A3Q8WWT9 602 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 GAL3ST3Q96A11 431 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 NACC2Q96BF6 587 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 ROPN1LQ96C74 230 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 KLHL29Q96CT2 875 aa11.38□□□□□ -0.59
CTNS-205ENST00000467663 ZNF764Q96H86 408 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms