RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 ZNF860A6NHJ4 632 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 EI24O14681 340 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 APBB3O95704 486 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 FCER2P06734 321 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 PGCP20142 388 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 F8A1P23610 371 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 AQP4P55087 323 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 ZNF763Q0D2J5 394 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 LACTB2Q53H82 288 aaPredicted RBP8.37□□□□□ -1.07
HPS4-209ENST00000466781 DCDC5Q6ZRR9 648 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 ERI1Q8IV48 349 aaKnown RBP8.37□□□□□ -1.07
HPS4-209ENST00000466781 IL17RCQ8NAC3 791 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 POGLUT1Q8NBL1 392 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 ASB15Q8WXK1 588 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 DDIT4LQ96D03 193 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 DMAC2Q9NW81 257 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 KCNIP1Q9NZI2 227 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 SLC17A6Q9P2U8 582 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 GHRLQ9UBU3 117 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 FBXL3Q9UKT7 428 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 GLOD5A6NK44 160 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 TLX2O43763 284 aaPredicted RBP8.37□□□□□ -1.07
HPS4-209ENST00000466781 LEFTY1O75610 366 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 OR2B3O76000 313 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 GSRP00390 522 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 CSTAP01040 98 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 IFNA5P01569 189 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 MRPL3P09001 348 aaKnown RBP8.37□□□□□ -1.07
HPS4-209ENST00000466781 RAC2P15153 192 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 RPS15AP62244 130 aaKnown RBP8.37□□□□□ -1.07
HPS4-209ENST00000466781 ANKRD26P1Q6NSI1 321 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 KCTD18Q6PI47 426 aaPredicted RBP8.37□□□□□ -1.07
HPS4-209ENST00000466781 TTLL10Q6ZVT0 673 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 HORMAD2Q8N7B1 307 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 CASTOR1Q8WTX7 329 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 FRS2Q8WU20 508 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 HSPA12BQ96MM6 686 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 MCHR1Q99705 422 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 MVB12BQ9H7P6 319 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 DKK3Q9UBP4 350 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 MKLN1Q9UL63 735 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 CDH10Q9Y6N8 788 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 TJP1Q07157 1748 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 TOGARAM1Q9Y4F4 1720 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 SLC35F4A4IF30 521 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 UNC119BA6NIH7 251 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 SEC14L5O43304 696 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 PROM1O43490 865 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 CDRT1O95170 752 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 SOX14O95416 240 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 PTNP21246 168 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 GPR143P51810 404 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 MLLT10P55197 1068 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 SNU13P55769 128 aaKnown RBP8.37□□□□□ -1.07
HPS4-209ENST00000466781 PSMA6P60900 246 aaKnown RBP8.37□□□□□ -1.07
HPS4-209ENST00000466781 EFR3AQ14156 821 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 PTCHD3Q3KNS1 767 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 UBE2Q1Q7Z7E8 422 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 NLGN4XQ8N0W4 816 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 TRAM1L1Q8N609 369 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 ADAMTS18Q8TE60 1221 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 TMBIM1Q969X1 311 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 B4GALT6Q9UBX8 382 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 EPHA6Q9UF33 1036 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 FETUBQ9UGM5 382 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 SALL4Q9UJQ4 1053 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 LOC100130705A0A1B0GUX0 176 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 HEPACAM2A8MVW5 462 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 DFNA5O60443 496 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 THBS2P35442 1172 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 UGT2B10P36537 528 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 PTGIRP43119 386 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 KCNC1P48547 511 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 FXYD6P3P58550 94 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 WDR5P61964 334 aaKnown RBP8.37□□□□□ -1.07
HPS4-209ENST00000466781 TRMT10BQ6PF06 316 aaKnown RBP8.37□□□□□ -1.07
HPS4-209ENST00000466781 ZNF852Q6ZMS4 543 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 CD300LFQ8TDQ1 290 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 FCAMRQ8WWV6 532 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 HOXB13Q92826 284 aaPredicted RBP8.37□□□□□ -1.07
HPS4-209ENST00000466781 FOXJ1Q92949 421 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 SLC2A11Q9BYW1 496 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 XKR8Q9H6D3 395 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 MGAT4BQ9UQ53 548 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 MAST2Q6P0Q8 1798 aa8.36□□□□□ -1.07
HPS4-209ENST00000466781 ZNF217O75362 1048 aa8.36□□□□□ -1.07
HPS4-209ENST00000466781 CNTN5O94779 1100 aa8.36□□□□□ -1.07
HPS4-209ENST00000466781 PRKD3O94806 890 aa8.36□□□□□ -1.07
HPS4-209ENST00000466781 POLR2HP52434 150 aaKnown RBP8.36□□□□□ -1.07
HPS4-209ENST00000466781 DGKQP52824 942 aa8.36□□□□□ -1.07
HPS4-209ENST00000466781 TMBIM6P55061 237 aa8.36□□□□□ -1.07
HPS4-209ENST00000466781 PLXDC1Q8IUK5 500 aa8.36□□□□□ -1.07
HPS4-209ENST00000466781 NUP43Q8NFH3 380 aa8.36□□□□□ -1.07
HPS4-209ENST00000466781 MSLNLQ96KJ4 702 aa8.36□□□□□ -1.07
HPS4-209ENST00000466781 TWNKQ96RR1 684 aa8.36□□□□□ -1.07
HPS4-209ENST00000466781 ATG5Q9H1Y0 275 aa8.36□□□□□ -1.07
HPS4-209ENST00000466781 C1orf21Q9H246 121 aa8.36□□□□□ -1.07
HPS4-209ENST00000466781 REEP4Q9H6H4 257 aa8.36□□□□□ -1.07
HPS4-209ENST00000466781 SLC2A6Q9UGQ3 507 aa8.36□□□□□ -1.07
HPS4-209ENST00000466781 PRAMEF11O60813 436 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms