RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 NMRK1Q9NWW6 199 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 VPS29Q9UBQ0 182 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 VTI1BQ9UEU0 232 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 ATG4BQ9Y4P1 393 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 CNTRLQ7Z7A1 2325 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 ZNF462Q96JM2 2506 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 A0A1W2PR48 441 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 TM9SF1O15321 606 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 SORBS2O94875 1100 aaKnown RBP8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 BPGMP07738 259 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 FGF4P08620 206 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 UROSP10746 265 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 CPN2P22792 545 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 PRPH2P23942 346 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 PPP2R1BP30154 601 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 HMOX2P30519 316 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 CD97P48960 835 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 SLC18A1P54219 525 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 FOXA1P55317 472 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 TRA2BP62995 288 aaKnown RBP8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 ACTN3Q08043 901 aaPredicted RBP8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 SLC13A2Q13183 592 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 RAPSNQ13702 412 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 ELAVL1Q15717 326 aaKnown RBP8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 BTBD16Q32M84 506 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 SGO1Q5FBB7 561 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 CFAP157Q5JU67 520 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 IRAK1BP1Q5VVH5 260 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 C18orf63Q68DL7 685 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 Q6ZS92 163 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 PTRH1Q86Y79 214 aaKnown RBP8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 AMER2Q8N7J2 671 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 Q8NA96 180 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 APCDD1LQ8NCL9 501 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 B3GNT7Q8NFL0 401 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 TM9SF4Q92544 642 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 HAS2Q92819 552 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 PNPLA2Q96AD5 504 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 TLCD1Q96CP7 247 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 METTL2AQ96IZ6 378 aaKnown RBP8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 KCNA7Q96RP8 456 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 NPAS2Q99743 824 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 ACPTQ9BZG2 426 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 RPF2Q9H7B2 306 aaKnown RBP8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 FBXW2Q9UKT8 454 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 SLC12A4Q9UP95 1085 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 CCL27Q9Y4X3 112 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 TIMM22Q9Y584 194 aa8.86□□□□□ -0.99
SDCCAG3-208ENST00000466579 SNPHO15079 494 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 BIRC5O15392 142 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 FGF17O60258 216 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 AIFM1O95831 613 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 KLK1P06870 262 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 NR2F6P10588 404 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 CHN1P15882 459 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 H2AFXP16104 143 aaPredicted RBP8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 TLX1P31314 330 aaPredicted RBP8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 ARRB2P32121 409 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 GALNSP34059 522 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 BUD31P41223 144 aaPredicted RBP8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 STT3AP46977 705 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 SERPINB4P48594 390 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 RAE1P78406 368 aaKnown RBP8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 MPP2Q14168 576 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 CASP8Q14790 479 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 UGT3A2Q3SY77 523 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 NADK2Q4G0N4 442 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 SPIN4Q56A73 249 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 KANK2Q63ZY3 851 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 SLC6A19Q695T7 634 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 CYP20A1Q6UW02 462 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 ATG14Q6ZNE5 492 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 CUZD1Q86UP6 607 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 TMEM132CQ8N3T6 1108 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 ZADH2Q8N4Q0 377 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 EFCAB3Q8N7B9 438 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 TEX19Q8NA77 164 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 MORN4Q8NDC4 146 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 OR14A16Q8NHC5 309 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 FAM76AQ8TAV0 307 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 DNAJB14Q8TBM8 379 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 PTPMT1Q8WUK0 201 aaPredicted RBP8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 TM4SF18Q96CE8 201 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 HBEGFQ99075 208 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 MECRQ9BV79 373 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 ALOXE3Q9BYJ1 711 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 STMN4Q9H169 189 aaPredicted RBP8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 OCEL1Q9H607 264 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 EPS8L2Q9H6S3 715 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 TMBIM4Q9HC24 238 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 TEX10Q9NXF1 929 aaPredicted RBP8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 PTGFRNQ9P2B2 879 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 MCM8Q9UJA3 840 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 ZNF223Q9UK11 482 aaPredicted RBP8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 CES1P1Q9UKY3 287 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 B3GNT3Q9Y2A9 372 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 PCDHA9Q9Y5H5 950 aa8.85□□□□□ -0.99
SDCCAG3-208ENST00000466579 AZIN1O14977 448 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 PGRMC2O15173 223 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 LDB3O75112 727 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms