RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 SLC2A12Q8TD20 617 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 SPOCK3Q9BQ16 436 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 PHACTR1Q9C0D0 580 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 TP63Q9H3D4 680 aaPredicted RBP17.77■□□□□ 0.44
COL9A3-206ENST00000466532 TEP1Q99973 2627 aaKnown RBP17.77■□□□□ 0.43
COL9A3-206ENST00000466532 FREM3P0C091 2139 aa17.77■□□□□ 0.43
COL9A3-206ENST00000466532 AKAP9Q99996 3911 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 A0A0G2JMM0 328 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 A0A1W2PPB8 328 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 A0A1W2PRS3 328 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 KIR3DP1A8MWS1 328 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 G3V3Y1 287 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 UBXN8O00124 270 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 TGFB1P01137 390 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 SLC35E2BP0CK96 405 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 POU3F2P20265 443 aaPredicted RBP17.76■□□□□ 0.43
COL9A3-206ENST00000466532 HIST1H1TP22492 207 aaPredicted RBP17.76■□□□□ 0.43
COL9A3-206ENST00000466532 CPN2P22792 545 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 SSR2P43308 183 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 NR0B1P51843 470 aaKnown RBP17.76■□□□□ 0.43
COL9A3-206ENST00000466532 PPIAP62937 165 aaKnown RBP17.76■□□□□ 0.43
COL9A3-206ENST00000466532 RNF4P78317 190 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 DLG1Q12959 904 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 AP5B1Q2VPB7 878 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 ZNF750Q32MQ0 723 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 TMEM35AQ53FP2 167 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 RTL4Q6ZR62 310 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 CHSY3Q70JA7 882 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 TBC1D1Q86TI0 1168 aaPredicted RBP17.76■□□□□ 0.43
COL9A3-206ENST00000466532 CCDC25Q86WR0 208 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 LAS2Q8IYD9 372 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 OR8K3Q8NH51 312 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 ATOH8Q96SQ7 321 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 ENKD1Q9H0I2 346 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 NMRAL1Q9HBL8 299 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 OPTCQ9UBM4 332 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 NINQ8N4C6 2090 aa17.76■□□□□ 0.43
COL9A3-206ENST00000466532 ANKRD17O75179 2603 aaKnown RBP17.76■□□□□ 0.43
COL9A3-206ENST00000466532 K7EPI3 171 aa17.75■□□□□ 0.43
COL9A3-206ENST00000466532 SAP18O00422 153 aaKnown RBP17.75■□□□□ 0.43
COL9A3-206ENST00000466532 SCELO95171 688 aa17.75■□□□□ 0.43
COL9A3-206ENST00000466532 PLTPP55058 493 aa17.75■□□□□ 0.43
COL9A3-206ENST00000466532 MEX3BQ6ZN04 569 aaKnown RBP17.75■□□□□ 0.43
COL9A3-206ENST00000466532 RGS9BPQ6ZS82 235 aa17.75■□□□□ 0.43
COL9A3-206ENST00000466532 GK5Q6ZS86 529 aa17.75■□□□□ 0.43
COL9A3-206ENST00000466532 SLC22A16Q86VW1 577 aa17.75■□□□□ 0.43
COL9A3-206ENST00000466532 OR7G3Q8NG95 312 aa17.75■□□□□ 0.43
COL9A3-206ENST00000466532 OR5L2Q8NGL0 311 aa17.75■□□□□ 0.43
COL9A3-206ENST00000466532 UBTD2Q8WUN7 234 aa17.75■□□□□ 0.43
COL9A3-206ENST00000466532 CHTF18Q8WVB6 975 aa17.75■□□□□ 0.43
COL9A3-206ENST00000466532 ASB5Q8WWX0 329 aa17.75■□□□□ 0.43
COL9A3-206ENST00000466532 ANKRD9Q96BM1 317 aaPredicted RBP17.75■□□□□ 0.43
COL9A3-206ENST00000466532 CMTM7Q96FZ5 175 aa17.75■□□□□ 0.43
COL9A3-206ENST00000466532 SCYL1Q96KG9 808 aa17.75■□□□□ 0.43
COL9A3-206ENST00000466532 TTTY12Q9BZ98 90 aa17.75■□□□□ 0.43
COL9A3-206ENST00000466532 COPS7AQ9UBW8 275 aa17.75■□□□□ 0.43
COL9A3-206ENST00000466532 UTP11Q9Y3A2 253 aaKnown RBP17.75■□□□□ 0.43
COL9A3-206ENST00000466532 POLQO75417 2590 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 ZNF354AO60765 605 aaPredicted RBP17.74■□□□□ 0.43
COL9A3-206ENST00000466532 KERAO60938 352 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 ETHE1O95571 254 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 LTA4HP09960 611 aaKnown RBP17.74■□□□□ 0.43
COL9A3-206ENST00000466532 COX7A2P14406 83 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 CNR1P21554 472 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 CRABP2P29373 138 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 SERPINB1P30740 379 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 STX2P32856 288 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 CAV1Q03135 178 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 DDX39BQ13838 428 aaKnown RBP17.74■□□□□ 0.43
COL9A3-206ENST00000466532 EMC4Q5J8M3 183 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 KHDRBS2Q5VWX1 349 aaKnown RBP17.74■□□□□ 0.43
COL9A3-206ENST00000466532 OR4C11Q6IEV9 310 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 OR4N5Q8IXE1 308 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 RNF175Q8N4F7 328 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 ACBD4Q8NC06 268 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 C7orf57Q8NEG2 295 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 FBF1Q8TES7 1133 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 ZNF721Q8TF20 911 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 ANP32BQ92688 251 aaKnown RBP17.74■□□□□ 0.43
COL9A3-206ENST00000466532 C14orf79Q96F83 325 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 FAM173AQ9BQD7 235 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 SORBS1Q9BX66 1292 aaKnown RBP17.74■□□□□ 0.43
COL9A3-206ENST00000466532 OR51B5Q9H339 312 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 ZDHHC11Q9H8X9 412 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 IGSF5Q9NSI5 407 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 ITGB1BP2Q9UKP3 347 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 RNF6Q9Y252 685 aa17.74■□□□□ 0.43
COL9A3-206ENST00000466532 EXPH5Q8NEV8 1989 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 NPIPA2E9PIF3 369 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 NPIPA3F8WFD2 350 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 FGF17O60258 216 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 EPB42P16452 691 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 MAGEA4P43358 317 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 STT3AP46977 705 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 RAP1GDS1P52306 607 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 KRTAP10-9P60411 292 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 TLE4Q04727 773 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 PCDH1Q08174 1060 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 SLAMF1Q13291 335 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 DEPDC1Q5TB30 811 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms