RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 WDR1O75083 606 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 P04436 131 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 CD99P14209 185 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 PIGAP37287 484 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 KCNC1P48547 511 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 MAN2A2P49641 1150 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 ARL4CP56559 192 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 TGM3Q08188 693 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 SERTAD2Q14140 314 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 FASTKD3Q14CZ7 662 aaKnown RBP17.39■□□□□ 0.37
SRSF4-202ENST00000466448 SNX31Q8N9S9 440 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 ZNF721Q8TF20 911 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 WDR34Q96EX3 536 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 PTCD3Q96EY7 689 aaKnown RBP17.39■□□□□ 0.37
SRSF4-202ENST00000466448 KCNC2Q96PR1 638 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 FOXC2Q99958 501 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 EFCAB11Q9BUY7 163 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 DERL2Q9GZP9 239 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 CXXC4Q9H2H0 198 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 RHOJQ9H4E5 214 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 LDAHQ9H6V9 325 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 CNOT10Q9H9A5 744 aaKnown RBP17.39■□□□□ 0.37
SRSF4-202ENST00000466448 DNAJB12Q9NXW2 375 aaKnown RBP17.39■□□□□ 0.37
SRSF4-202ENST00000466448 ATG4BQ9Y4P1 393 aa17.39■□□□□ 0.37
SRSF4-202ENST00000466448 TP73O15350 636 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 CTAG2O75638 210 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 PIAS1O75925 651 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 WISP3O95389 354 aaPredicted RBP17.38■□□□□ 0.37
SRSF4-202ENST00000466448 ENDOUP21128 410 aaKnown RBP17.38■□□□□ 0.37
SRSF4-202ENST00000466448 HSPA7P48741 367 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 ASPHQ12797 758 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 SLC10A1Q14973 349 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 SLC25A35Q3KQZ1 300 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 C1orf185Q5T7R7 199 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 WLSQ5T9L3 541 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 ADGRD1Q6QNK2 874 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 ZZZ3Q8IYH5 903 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 TCAIMQ8N3R3 496 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 ACOT4Q8N9L9 421 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 FBXO36Q8NEA4 188 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 ANKRD9Q96BM1 317 aaPredicted RBP17.38■□□□□ 0.37
SRSF4-202ENST00000466448 SARAFQ96BY9 339 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 RUNDC3BQ96NL0 473 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 ROGDIQ9GZN7 287 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 CCM2LQ9NUG4 571 aaPredicted RBP17.38■□□□□ 0.37
SRSF4-202ENST00000466448 SPRR3Q9UBC9 169 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 COPS7AQ9UBW8 275 aa17.38■□□□□ 0.37
SRSF4-202ENST00000466448 TRGV5A0A0B4J1U4 118 aa17.37■□□□□ 0.37
SRSF4-202ENST00000466448 RTCAO00442 366 aaKnown RBP17.37■□□□□ 0.37
SRSF4-202ENST00000466448 STK16O75716 305 aa17.37■□□□□ 0.37
SRSF4-202ENST00000466448 EPORP19235 508 aa17.37■□□□□ 0.37
SRSF4-202ENST00000466448 ATP5A1P25705 553 aaKnown RBP17.37■□□□□ 0.37
SRSF4-202ENST00000466448 FOLH1Q04609 750 aa17.37■□□□□ 0.37
SRSF4-202ENST00000466448 PDIA2Q13087 525 aaKnown RBP17.37■□□□□ 0.37
SRSF4-202ENST00000466448 SNTB1Q13884 538 aaKnown RBP17.37■□□□□ 0.37
SRSF4-202ENST00000466448 PDK4Q16654 411 aa17.37■□□□□ 0.37
SRSF4-202ENST00000466448 MPEG1Q2M385 716 aa17.37■□□□□ 0.37
SRSF4-202ENST00000466448 ZNF791Q3KP31 576 aaPredicted RBP17.37■□□□□ 0.37
SRSF4-202ENST00000466448 ARSKQ6UWY0 536 aa17.37■□□□□ 0.37
SRSF4-202ENST00000466448 SYDE1Q6ZW31 735 aaPredicted RBP17.37■□□□□ 0.37
SRSF4-202ENST00000466448 WDR53Q7Z5U6 358 aaPredicted RBP17.37■□□□□ 0.37
SRSF4-202ENST00000466448 GPSM1Q86YR5 675 aa17.37■□□□□ 0.37
SRSF4-202ENST00000466448 C9orf40Q8IXQ3 194 aa17.37■□□□□ 0.37
SRSF4-202ENST00000466448 NINJ1Q92982 152 aa17.37■□□□□ 0.37
SRSF4-202ENST00000466448 TBCDQ9BTW9 1192 aa17.37■□□□□ 0.37
SRSF4-202ENST00000466448 POLDIP3Q9BY77 421 aaKnown RBP17.37■□□□□ 0.37
SRSF4-202ENST00000466448 LIME1Q9H400 295 aa17.37■□□□□ 0.37
SRSF4-202ENST00000466448 EXO5Q9H790 373 aa17.37■□□□□ 0.37
SRSF4-202ENST00000466448 CAB39LQ9H9S4 337 aa17.37■□□□□ 0.37
SRSF4-202ENST00000466448 SH2D2AQ9NP31 389 aa17.37■□□□□ 0.37
SRSF4-202ENST00000466448 ZNF358Q9NW07 568 aa17.37■□□□□ 0.37
SRSF4-202ENST00000466448 ALKBH4Q9NXW9 302 aa17.37■□□□□ 0.37
SRSF4-202ENST00000466448 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.37■□□□□ 0.37
SRSF4-202ENST00000466448 FAM221AA4D161 298 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 FGF17O60258 216 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 HCN1O60741 890 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 SEC31AO94979 1220 aaKnown RBP17.36■□□□□ 0.37
SRSF4-202ENST00000466448 IGKV3-11P04433 115 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 RFPL3SP0C7P2 107 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 CCDC166P0CW27 439 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 MSH2P43246 934 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 SLC12A2P55011 1212 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 DR1Q01658 176 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 OR4D1Q15615 310 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 PIGGQ5H8A4 983 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 CDKL4Q5MAI5 379 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 SULT1C3Q6IMI6 304 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 OR4N5Q8IXE1 308 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 KLHL7Q8IXQ5 586 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 SRFBP1Q8NEF9 429 aaKnown RBP17.36■□□□□ 0.37
SRSF4-202ENST00000466448 NUBPLQ8TB37 319 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 ZNF473Q8WTR7 871 aaKnown RBP17.36■□□□□ 0.37
SRSF4-202ENST00000466448 MS4A8Q9BY19 250 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 ZNF703Q9H7S9 590 aaPredicted RBP17.36■□□□□ 0.37
SRSF4-202ENST00000466448 SMYD2Q9NRG4 433 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 NSMCE4AQ9NXX6 385 aa17.36■□□□□ 0.37
SRSF4-202ENST00000466448 MTO1Q9Y2Z2 717 aaKnown RBP17.36■□□□□ 0.37
SRSF4-202ENST00000466448 ZNF469Q96JG9 3925 aaPredicted RBP17.35■□□□□ 0.37
SRSF4-202ENST00000466448 ZNF407Q9C0G0 2248 aa17.35■□□□□ 0.37
SRSF4-202ENST00000466448 FAM47E-STBD1D6RA91 191 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms