RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 TNFSF10P50591 281 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 RIDAP52758 137 aaKnown RBP3.46□□□□□ -1.86
LRCH3-211ENST00000466054 NDUFV3P56181 108 aaKnown RBP3.46□□□□□ -1.86
LRCH3-211ENST00000466054 NME5P56597 212 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 SLC8A3P57103 927 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 RIGQ13278 110 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 GIT2Q14161 759 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 FASTKQ14296 549 aaKnown RBP3.46□□□□□ -1.86
LRCH3-211ENST00000466054 ZNF239Q16600 458 aaKnown RBP3.46□□□□□ -1.86
LRCH3-211ENST00000466054 KNOP1Q1ED39 458 aaKnown RBP3.46□□□□□ -1.86
LRCH3-211ENST00000466054 IFI44LQ53G44 452 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 CT45A2Q5DJT8 189 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 C1orf189Q5VU69 101 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 CAPN13Q6MZZ7 669 aaPredicted RBP3.46□□□□□ -1.86
LRCH3-211ENST00000466054 CATSPER3Q86XQ3 398 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 CCDC197Q8NCU1 140 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 TCP11Q8WWU5 503 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 PRCCQ92733 491 aaPredicted RBP3.46□□□□□ -1.86
LRCH3-211ENST00000466054 HAS2Q92819 552 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 C5orf30Q96GV9 206 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 PDLIM5Q96HC4 596 aaKnown RBP3.46□□□□□ -1.86
LRCH3-211ENST00000466054 MRPL9Q9BYD2 267 aaKnown RBP3.46□□□□□ -1.86
LRCH3-211ENST00000466054 HEXA-AS1Q9H8Q6 139 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 WDR41Q9HAD4 459 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 PLEKHA3Q9HB20 300 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 COMMD8Q9NX08 183 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 MTRRQ9UBK8 725 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 EXOC7Q9UPT5 735 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 SH3GLB1Q9Y371 365 aa3.46□□□□□ -1.86
LRCH3-211ENST00000466054 COL5A2P05997 1499 aaPredicted RBP3.46□□□□□ -1.86
LRCH3-211ENST00000466054 OR5H15A6NDH6 313 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 K7EQG2 157 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 PDHXO00330 501 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 FBP2O00757 339 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 ZNF749O43361 778 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 B4GAT1O43505 415 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 PRDM1O75626 825 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 PNPP00491 289 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 IGHG1P01857 330 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 ATP6V1B1P15313 513 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 PPP2R1AP30153 589 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 PGFP49763 221 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 ADARP55265 1226 aaKnown RBP3.45□□□□□ -1.86
LRCH3-211ENST00000466054 KCNK10P57789 538 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 ARF5P84085 180 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 FCHO2Q0JRZ9 810 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 HSPA14Q0VDF9 509 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 STX1AQ16623 288 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 ECSCRQ19T08 205 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 POM121L1PQ3SYA9 428 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 MCM10Q7L590 875 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 KCNMB4Q86W47 210 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 GVQW1Q8N7I0 195 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 SSC4DQ8WTU2 575 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 FAM222BQ8WU58 562 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 FAM46BQ96A09 425 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 NABP1Q96AH0 204 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 EEF2KMTQ96G04 330 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 ZNF597Q96LX8 424 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 SPAG8Q99932 426 aaPredicted RBP3.45□□□□□ -1.86
LRCH3-211ENST00000466054 JPT2Q9H910 190 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 SP140LQ9H930 580 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 MID1IP1Q9NPA3 183 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 DEPPQ9NTK1 212 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 EXOC6BQ9Y2D4 811 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 OR1A2Q9Y585 309 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 AUP1Q9Y679 476 aa3.45□□□□□ -1.86
LRCH3-211ENST00000466054 FGD5Q6ZNL6 1462 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 TRGV8A0A0C4DH27 118 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 TMCO5BA8MYB1 307 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 PSMD3O43242 534 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 KIAA0513O60268 411 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 KINO60870 393 aaKnown RBP3.44□□□□□ -1.86
LRCH3-211ENST00000466054 MMP10P09238 476 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 NUDT17P0C025 328 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 LMO2P25791 158 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 STIP1P31948 543 aaKnown RBP3.44□□□□□ -1.86
LRCH3-211ENST00000466054 ETV5P41161 510 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 ALDH3B1P43353 468 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 SLC1A6P48664 564 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 PRELPP51888 382 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 C17orf67Q0P5P2 114 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 OR1C1Q15619 314 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 MUC21Q5SSG8 566 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 NEPROQ6NW34 567 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 B3GLCTQ6Y288 498 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 ZNF730Q6ZMV8 503 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 TMUB2Q71RG4 321 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 SLC47A2Q86VL8 602 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 BANPQ8N9N5 519 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 MSANTD4Q8NCY6 345 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 OR1B1Q8NGR6 318 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 UBTD2Q8WUN7 234 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 PCNPQ8WW12 178 aaKnown RBP3.44□□□□□ -1.86
LRCH3-211ENST00000466054 ANKRD27Q96NW4 1050 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 TAAR6Q96RI8 345 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 TNFRSF13CQ96RJ3 184 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 RAB40CQ96S21 281 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 AGPAT1Q99943 283 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 SOSTQ9BQB4 213 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms