RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 SLC38A8A6NNN8 435 aa18.83■□□□□ 0.61
SDF4-205ENST00000465727 LYRM1O43325 122 aa18.83■□□□□ 0.61
SDF4-205ENST00000465727 SMAD6O43541 496 aaKnown RBP18.83■□□□□ 0.61
SDF4-205ENST00000465727 SOCS5O75159 536 aa18.83■□□□□ 0.61
SDF4-205ENST00000465727 UBL4AP11441 157 aa18.83■□□□□ 0.61
SDF4-205ENST00000465727 PRKACBP22694 351 aa18.83■□□□□ 0.61
SDF4-205ENST00000465727 ARPP19P56211 112 aa18.83■□□□□ 0.61
SDF4-205ENST00000465727 MRPL28Q13084 256 aaKnown RBP18.83■□□□□ 0.61
SDF4-205ENST00000465727 DDX39BQ13838 428 aaKnown RBP18.83■□□□□ 0.61
SDF4-205ENST00000465727 HEPACAMQ14CZ8 416 aa18.83■□□□□ 0.61
SDF4-205ENST00000465727 PLEKHS1Q5SXH7 462 aa18.83■□□□□ 0.61
SDF4-205ENST00000465727 AMIGO1Q86WK6 493 aa18.83■□□□□ 0.61
SDF4-205ENST00000465727 REM2Q8IYK8 340 aaPredicted RBP18.83■□□□□ 0.61
SDF4-205ENST00000465727 SLC6A18Q96N87 628 aa18.83■□□□□ 0.61
SDF4-205ENST00000465727 HCN2Q9UL51 889 aa18.83■□□□□ 0.61
SDF4-205ENST00000465727 PRG3Q9Y2Y8 225 aaPredicted RBP18.83■□□□□ 0.61
SDF4-205ENST00000465727 IGLV3-16A0A075B6K0 115 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 PRR23AA6NEV1 266 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 STC2O76061 302 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 RAB36O95755 333 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 ARAFP10398 606 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 POLR2CP19387 275 aaPredicted RBP18.83■□□□□ 0.6
SDF4-205ENST00000465727 HLA-FP30511 346 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 TIA1P31483 386 aaKnown RBP eCLIP18.83■□□□□ 0.65e-7■■□□□ 14
SDF4-205ENST00000465727 WDR5P61964 334 aaKnown RBP18.83■□□□□ 0.6
SDF4-205ENST00000465727 SF3A2Q15428 464 aaKnown RBP18.83■□□□□ 0.6
SDF4-205ENST00000465727 WSCD2Q2TBF2 565 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 ZNF852Q6ZMS4 543 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 LAPTM4BQ86VI4 370 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 GPR65Q8IYL9 337 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 UBE2J2Q8N2K1 259 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 ZNF557Q8N988 423 aaPredicted RBP18.83■□□□□ 0.6
SDF4-205ENST00000465727 TMEM163Q8TC26 289 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 KATNB1Q9BVA0 655 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 ATG10Q9H0Y0 220 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 REEP4Q9H6H4 257 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 C12orf10Q9HB07 376 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 RC3H2Q9HBD1 1191 aaKnown RBP18.83■□□□□ 0.6
SDF4-205ENST00000465727 ISYNA1Q9NPH2 558 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 GULP1Q9UBP9 304 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 STOML2Q9UJZ1 356 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 NOD1Q9Y239 953 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 GSTK1Q9Y2Q3 226 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 DOCK3Q8IZD9 2030 aa18.83■□□□□ 0.6
SDF4-205ENST00000465727 GNG14A0A1W2PPG7 69 aa18.82■□□□□ 0.6
SDF4-205ENST00000465727 AKR7A2O43488 359 aa18.82■□□□□ 0.6
SDF4-205ENST00000465727 GSTM1P09488 218 aa18.82■□□□□ 0.6
SDF4-205ENST00000465727 CLEC2LP0C7M8 214 aa18.82■□□□□ 0.6
SDF4-205ENST00000465727 ARSBP15848 533 aa18.82■□□□□ 0.6
SDF4-205ENST00000465727 RPL3P39023 403 aaKnown RBP18.82■□□□□ 0.6
SDF4-205ENST00000465727 MAN2A2P49641 1150 aa18.82■□□□□ 0.6
SDF4-205ENST00000465727 B4GALNT1Q00973 533 aa18.82■□□□□ 0.6
SDF4-205ENST00000465727 DOC2AQ14183 400 aa18.82■□□□□ 0.6
SDF4-205ENST00000465727 FAM214AQ32MH5 1076 aa18.82■□□□□ 0.6
SDF4-205ENST00000465727 SLC25A30Q5SVS4 291 aa18.82■□□□□ 0.6
SDF4-205ENST00000465727 TMC8Q8IU68 726 aa18.82■□□□□ 0.6
SDF4-205ENST00000465727 CLP1Q92989 425 aaKnown RBP18.82■□□□□ 0.6
SDF4-205ENST00000465727 ZBED6CLQ96FA7 236 aaPredicted RBP18.82■□□□□ 0.6
SDF4-205ENST00000465727 LYSMD1Q96S90 227 aa18.82■□□□□ 0.6
SDF4-205ENST00000465727 MCUBQ9NWR8 336 aa18.82■□□□□ 0.6
SDF4-205ENST00000465727 SGK494L7N484 410 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 SLC30A4O14863 429 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 KPNA5O15131 536 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 EOMESO95936 686 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 UQCRC1P31930 480 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 XKP51811 444 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 IKZF1Q13422 519 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 CYP27C1Q4G0S4 372 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 ZBTB37Q5TC79 503 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 GPR26Q8NDV2 337 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 C2orf15Q8WU43 125 aaKnown RBP18.81■□□□□ 0.6
SDF4-205ENST00000465727 OVCA2Q8WZ82 227 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 AKAP1Q92667 903 aaKnown RBP eCLIP18.81■□□□□ 0.66e-11■■■■□ 22.7
SDF4-205ENST00000465727 UPRTQ96BW1 309 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 QRFPRQ96P65 431 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 KCNJ15Q99712 375 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 MYADML2A6NDP7 307 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 WASHC1A8K0Z3 465 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 FAAHO00519 579 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 GJB5O95377 273 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 FGF9P31371 208 aaPredicted RBP18.81■□□□□ 0.6
SDF4-205ENST00000465727 SSTR4P31391 388 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 SF1Q15637 639 aaKnown RBP18.81■□□□□ 0.6
SDF4-205ENST00000465727 ZNF385BQ569K4 471 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 HECTD3Q5T447 861 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 ANKS3Q6ZW76 656 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 PDZD3Q86UT5 571 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 THOC6Q86W42 341 aaKnown RBP18.81■□□□□ 0.6
SDF4-205ENST00000465727 FAM20CQ8IXL6 584 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 FAM26EQ8N5C1 309 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 LSMEM1Q8N8F7 131 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 CREB3L1Q96BA8 519 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 TEFMQ96QE5 360 aaKnown RBP18.81■□□□□ 0.6
SDF4-205ENST00000465727 DCLRE1CQ96SD1 692 aaKnown RBP18.81■□□□□ 0.6
SDF4-205ENST00000465727 TMEM43Q9BTV4 400 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 TM6SF2Q9BZW4 377 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 SGK2Q9HBY8 427 aa18.81■□□□□ 0.6
SDF4-205ENST00000465727 IRGMA1A4Y4 181 aa18.8■□□□□ 0.6
SDF4-205ENST00000465727 LINC00862A6NCI5 91 aa18.8■□□□□ 0.6
SDF4-205ENST00000465727 E7EQ34 232 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms