RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 TRIM73Q86UV7 250 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 TMEM19Q96HH6 336 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 F2RL3Q96RI0 385 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 CNOT2Q9NZN8 540 aaKnown RBP17.44■□□□□ 0.38
SYNE4-204ENST00000465425 IFT52Q9Y366 437 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 CFAP20Q9Y6A4 193 aaKnown RBP17.44■□□□□ 0.38
SYNE4-204ENST00000465425 A3GALT2U3KPV4 340 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 CAPN5O15484 640 aaPredicted RBP17.43■□□□□ 0.38
SYNE4-204ENST00000465425 ZW10O43264 779 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 UPK1BO75841 260 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 RPN2P04844 631 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 GRK5P34947 590 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 CNR2P34972 360 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 LIM2P55344 173 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 RPA4Q13156 261 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 ERN2Q76MJ5 926 aaKnown RBP17.43■□□□□ 0.38
SYNE4-204ENST00000465425 NLGN4XQ8N0W4 816 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 CADM3Q8N126 398 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 FAM46DQ8NEK8 389 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 A4GALTQ9NPC4 353 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 DEC1Q9P2X7 70 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 FTSJ1Q9UET6 329 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 KCND3Q9UK17 655 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 WBP11Q9Y2W2 641 aaKnown RBP17.43■□□□□ 0.38
SYNE4-204ENST00000465425 ISPDA4D126 451 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 FAM227AF5H4B4 570 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 PDE9AO76083 593 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 RECKO95980 971 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 EIF2B2P49770 351 aaKnown RBP17.43■□□□□ 0.38
SYNE4-204ENST00000465425 RPS3AP61247 264 aaKnown RBP17.43■□□□□ 0.38
SYNE4-204ENST00000465425 IRF3Q14653 427 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 TIMM50Q3ZCQ8 353 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 TPRG1LQ5T0D9 272 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 AGAP7PQ5VUJ5 663 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 FAM92BQ6ZTR7 304 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 ADGRF3Q8IZF5 1079 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 TM4SF18Q96CE8 201 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 QRFPRQ96P65 431 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 CDCA4Q9BXL8 241 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 MS4A8Q9BY19 250 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 ABCG4Q9H172 646 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 RHBGQ9H310 441 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 SLAMF7Q9NQ25 335 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 TAS2R16Q9NYV7 291 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 CCDC59Q9P031 241 aaKnown RBP17.43■□□□□ 0.38
SYNE4-204ENST00000465425 KLK4Q9Y5K2 254 aa17.43■□□□□ 0.38
SYNE4-204ENST00000465425 PCYT1BQ9Y5K3 369 aaPredicted RBP17.43■□□□□ 0.38
SYNE4-204ENST00000465425 TRBV4-1A0A0J9YWV2 114 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 KDM1AO60341 852 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 ADAP00813 363 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 SERPINB1P30740 379 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 BMPR1AP36894 532 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 SLC6A11P48066 632 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 DGKEP52429 567 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 INAVAQ3KP66 663 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 SOWAHCQ53LP3 525 aaPredicted RBP17.42■□□□□ 0.38
SYNE4-204ENST00000465425 MMAAQ8IVH4 418 aaKnown RBP17.42■□□□□ 0.38
SYNE4-204ENST00000465425 ANKRD53Q8N9V6 530 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 PLA2G15Q8NCC3 412 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 OR5K2Q8NHB8 316 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 RAB8BQ92930 207 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 ERLEC1Q96DZ1 483 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 CENPOQ9BU64 300 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 RNF167Q9H6Y7 350 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 PELI2Q9HAT8 420 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 CUEDC1Q9NWM3 386 aaPredicted RBP17.42■□□□□ 0.38
SYNE4-204ENST00000465425 C5AR2Q9P296 337 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 FFAR1O14842 300 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 DSCR3O14972 297 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 OR10H3O60404 316 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 TBX6O95947 436 aaPredicted RBP17.42■□□□□ 0.38
SYNE4-204ENST00000465425 SOX6P35712 828 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 VIPR2P41587 438 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 CCR8P51685 355 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 CRISP3P54108 245 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 ARHGAP19Q14CB8 494 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 ZNF181Q2M3W8 571 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 DCST1Q5T197 706 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 ZNF770Q6IQ21 691 aaPredicted RBP17.42■□□□□ 0.38
SYNE4-204ENST00000465425 C6orf120Q7Z4R8 191 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 LACC1Q8IV20 430 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 ETFBKMTQ8IXQ9 262 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 WDR36Q8NI36 951 aaKnown RBP17.42■□□□□ 0.38
SYNE4-204ENST00000465425 EXOSC8Q96B26 276 aaKnown RBP17.42■□□□□ 0.38
SYNE4-204ENST00000465425 ZBED6CLQ96FA7 236 aaPredicted RBP17.42■□□□□ 0.38
SYNE4-204ENST00000465425 PAWRQ96IZ0 340 aaKnown RBP17.42■□□□□ 0.38
SYNE4-204ENST00000465425 ZFYVE19Q96K21 471 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 MGLLQ99685 303 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 ZNF717Q9BY31 904 aaPredicted RBP17.42■□□□□ 0.38
SYNE4-204ENST00000465425 IL23AQ9NPF7 189 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 C11orf16Q9NQ32 467 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 PCDHGA3Q9Y5H0 932 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 LRRK1Q38SD2 2015 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 NOTCH4Q99466 2003 aa17.42■□□□□ 0.38
SYNE4-204ENST00000465425 PTPRSQ13332 1948 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 FEZF1A0PJY2 475 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 TBX1O43435 398 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 MFN2O95140 757 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 BSGP35613 385 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 CD300CQ08708 224 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms