RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 ART5Q96L15 291 aa8.59□□□□□ -1.03
APP-213ENST00000464867 JSRP1Q96MG2 331 aaPredicted RBP8.59□□□□□ -1.03
APP-213ENST00000464867 FAM111AQ96PZ2 611 aa8.59□□□□□ -1.03
APP-213ENST00000464867 RHNO1Q9BSD3 238 aa8.59□□□□□ -1.03
APP-213ENST00000464867 ANP32EQ9BTT0 268 aa8.59□□□□□ -1.03
APP-213ENST00000464867 PRDM14Q9GZV8 571 aa8.59□□□□□ -1.03
APP-213ENST00000464867 ARNT2Q9HBZ2 717 aa8.59□□□□□ -1.03
APP-213ENST00000464867 SH2D2AQ9NP31 389 aa8.59□□□□□ -1.03
APP-213ENST00000464867 SEMA4BQ9NPR2 832 aaPredicted RBP8.59□□□□□ -1.03
APP-213ENST00000464867 UVRAGQ9P2Y5 699 aa8.59□□□□□ -1.03
APP-213ENST00000464867 LIMA1Q9UHB6 759 aaKnown RBP8.59□□□□□ -1.03
APP-213ENST00000464867 ANAPC5Q9UJX4 755 aa8.59□□□□□ -1.03
APP-213ENST00000464867 PACSIN3Q9UKS6 424 aa8.59□□□□□ -1.03
APP-213ENST00000464867 LAMP3Q9UQV4 416 aa8.59□□□□□ -1.03
APP-213ENST00000464867 RUVBL2Q9Y230 463 aaKnown RBP8.59□□□□□ -1.03
APP-213ENST00000464867 CCDC162PA2VCL2 907 aa8.58□□□□□ -1.04
APP-213ENST00000464867 OR51F1A6NGY5 319 aa8.58□□□□□ -1.04
APP-213ENST00000464867 TCF21O43680 179 aa8.58□□□□□ -1.04
APP-213ENST00000464867 GPRIN2O60269 458 aa8.58□□□□□ -1.04
APP-213ENST00000464867 TRAPPC6AO75865 159 aa8.58□□□□□ -1.04
APP-213ENST00000464867 RFPL3SP0C7P2 107 aa8.58□□□□□ -1.04
APP-213ENST00000464867 CCL3P10147 92 aa8.58□□□□□ -1.04
APP-213ENST00000464867 ERGP11308 486 aa8.58□□□□□ -1.04
APP-213ENST00000464867 CYP4B1P13584 511 aa8.58□□□□□ -1.04
APP-213ENST00000464867 CREB1P16220 341 aa8.58□□□□□ -1.04
APP-213ENST00000464867 PECAM1P16284 738 aaPredicted RBP8.58□□□□□ -1.04
APP-213ENST00000464867 CTNNA2P26232 953 aa8.58□□□□□ -1.04
APP-213ENST00000464867 GDF1P27539 372 aa8.58□□□□□ -1.04
APP-213ENST00000464867 FOXN2P32314 431 aa8.58□□□□□ -1.04
APP-213ENST00000464867 ACVR1BP36896 505 aa8.58□□□□□ -1.04
APP-213ENST00000464867 PIGAP37287 484 aa8.58□□□□□ -1.04
APP-213ENST00000464867 GPR143P51810 404 aa8.58□□□□□ -1.04
APP-213ENST00000464867 OLR1P78380 273 aa8.58□□□□□ -1.04
APP-213ENST00000464867 DEFA6Q01524 100 aa8.58□□□□□ -1.04
APP-213ENST00000464867 CRYZQ08257 329 aaKnown RBP8.58□□□□□ -1.04
APP-213ENST00000464867 FOXF2Q12947 444 aa8.58□□□□□ -1.04
APP-213ENST00000464867 DEFB134Q4QY38 66 aa8.58□□□□□ -1.04
APP-213ENST00000464867 FASTKD1Q53R41 847 aaKnown RBP8.58□□□□□ -1.04
APP-213ENST00000464867 HIST2H2BDQ6DRA6 164 aa8.58□□□□□ -1.04
APP-213ENST00000464867 CAPN13Q6MZZ7 669 aaPredicted RBP8.58□□□□□ -1.04
APP-213ENST00000464867 SCIMPQ6UWF3 145 aa8.58□□□□□ -1.04
APP-213ENST00000464867 ZNF704Q6ZNC4 412 aaPredicted RBP8.58□□□□□ -1.04
APP-213ENST00000464867 LRRC25Q8N386 305 aaPredicted RBP8.58□□□□□ -1.04
APP-213ENST00000464867 C9orf106Q8NAJ2 232 aa8.58□□□□□ -1.04
APP-213ENST00000464867 OR5L2Q8NGL0 311 aa8.58□□□□□ -1.04
APP-213ENST00000464867 GABPB2Q8TAK5 448 aaPredicted RBP8.58□□□□□ -1.04
APP-213ENST00000464867 LKAAEAR1Q8TD35 194 aa8.58□□□□□ -1.04
APP-213ENST00000464867 TM4SF19Q96DZ7 209 aa8.58□□□□□ -1.04
APP-213ENST00000464867 ZC3HAV1LQ96H79 300 aaKnown RBP8.58□□□□□ -1.04
APP-213ENST00000464867 DMRTB1Q96MA1 342 aa8.58□□□□□ -1.04
APP-213ENST00000464867 QKIQ96PU8 341 aaKnown RBP eCLIP8.58□□□□□ -1.04
APP-213ENST00000464867 PIGQQ9BRB3 760 aa8.58□□□□□ -1.04
APP-213ENST00000464867 SLC39A3Q9BRY0 314 aa8.58□□□□□ -1.04
APP-213ENST00000464867 SLCO5A1Q9H2Y9 848 aa8.58□□□□□ -1.04
APP-213ENST00000464867 NECTIN3Q9NQS3 549 aa8.58□□□□□ -1.04
APP-213ENST00000464867 DDX56Q9NY93 547 aaKnown RBP8.58□□□□□ -1.04
APP-213ENST00000464867 PPIEQ9UNP9 301 aaKnown RBP8.58□□□□□ -1.04
APP-213ENST00000464867 BZW2Q9Y6E2 419 aaKnown RBP8.58□□□□□ -1.04
APP-213ENST00000464867 NBEAL2Q6ZNJ1 2754 aa8.58□□□□□ -1.04
APP-213ENST00000464867 MED12Q93074 2177 aa8.58□□□□□ -1.04
APP-213ENST00000464867 IGKV3D-11A0A0A0MRZ8 115 aa8.57□□□□□ -1.04
APP-213ENST00000464867 H7C0C1 242 aa8.57□□□□□ -1.04
APP-213ENST00000464867 MYO1CO00159 1063 aa8.57□□□□□ -1.04
APP-213ENST00000464867 PRMT5O14744 637 aaPredicted RBP8.57□□□□□ -1.04
APP-213ENST00000464867 GALR3O60755 368 aaPredicted RBP8.57□□□□□ -1.04
APP-213ENST00000464867 RCBTB2O95199 551 aa8.57□□□□□ -1.04
APP-213ENST00000464867 CATP04040 527 aaKnown RBP8.57□□□□□ -1.04
APP-213ENST00000464867 RNH1P13489 461 aaKnown RBP8.57□□□□□ -1.04
APP-213ENST00000464867 ALOX12P18054 663 aa8.57□□□□□ -1.04
APP-213ENST00000464867 PSMB4P28070 264 aa8.57□□□□□ -1.04
APP-213ENST00000464867 RPL21P46778 160 aaKnown RBP8.57□□□□□ -1.04
APP-213ENST00000464867 ATP5OP48047 213 aa8.57□□□□□ -1.04
APP-213ENST00000464867 PCYT1AP49585 367 aa8.57□□□□□ -1.04
APP-213ENST00000464867 FAM27E3Q08E93 113 aa8.57□□□□□ -1.04
APP-213ENST00000464867 SPARCL1Q14515 664 aa8.57□□□□□ -1.04
APP-213ENST00000464867 TMEM249Q2WGJ8 235 aa8.57□□□□□ -1.04
APP-213ENST00000464867 FAM174BQ3ZCQ3 159 aa8.57□□□□□ -1.04
APP-213ENST00000464867 BEX5Q5H9J7 111 aa8.57□□□□□ -1.04
APP-213ENST00000464867 AARS2Q5JTZ9 985 aaKnown RBP8.57□□□□□ -1.04
APP-213ENST00000464867 CYB5R2Q6BCY4 276 aa8.57□□□□□ -1.04
APP-213ENST00000464867 DENND5AQ6IQ26 1287 aa8.57□□□□□ -1.04
APP-213ENST00000464867 AFTPHQ6ULP2 937 aa8.57□□□□□ -1.04
APP-213ENST00000464867 SH2D5Q6ZV89 423 aa8.57□□□□□ -1.04
APP-213ENST00000464867 TMEM132CQ8N3T6 1108 aa8.57□□□□□ -1.04
APP-213ENST00000464867 PPFIBP2Q8ND30 876 aa8.57□□□□□ -1.04
APP-213ENST00000464867 INTS12Q96CB8 462 aaKnown RBP8.57□□□□□ -1.04
APP-213ENST00000464867 PDLIM2Q96JY6 352 aa8.57□□□□□ -1.04
APP-213ENST00000464867 CCDC138Q96M89 665 aa8.57□□□□□ -1.04
APP-213ENST00000464867 HS6ST2Q96MM7 605 aa8.57□□□□□ -1.04
APP-213ENST00000464867 TNFRSF13CQ96RJ3 184 aa8.57□□□□□ -1.04
APP-213ENST00000464867 GORASP1Q9BQQ3 440 aa8.57□□□□□ -1.04
APP-213ENST00000464867 RHBGQ9H310 441 aa8.57□□□□□ -1.04
APP-213ENST00000464867 ESRP2Q9H6T0 727 aaKnown RBP8.57□□□□□ -1.04
APP-213ENST00000464867 CLK4Q9HAZ1 481 aaKnown RBP8.57□□□□□ -1.04
APP-213ENST00000464867 BARX1Q9HBU1 254 aaPredicted RBP8.57□□□□□ -1.04
APP-213ENST00000464867 ZNF223Q9UK11 482 aaPredicted RBP8.57□□□□□ -1.04
APP-213ENST00000464867 MMACHCQ9Y4U1 282 aa8.57□□□□□ -1.04
APP-213ENST00000464867 CLCA3PQ9Y6N3 262 aa8.57□□□□□ -1.04
APP-213ENST00000464867 MED12LQ86YW9 2145 aa8.57□□□□□ -1.04
APP-213ENST00000464867 YLPM1P49750 1951 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms