RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CA8P35219 290 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 TGM4P49221 684 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 ARPP19P56211 112 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 WDR5P61964 334 aaKnown RBP6.96□□□□□ -1.29
USP48-206ENST00000464577 RRAS2P62070 204 aaPredicted RBP6.96□□□□□ -1.29
USP48-206ENST00000464577 HBA1P69905 142 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 ALDH6A1Q02252 535 aaKnown RBP6.96□□□□□ -1.29
USP48-206ENST00000464577 MAB21L1Q13394 359 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 IKZF1Q13422 519 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 PDE7AQ13946 482 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 DOC2AQ14183 400 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 PLK5Q496M5 336 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 ZNF385BQ569K4 471 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 C3orf38Q5JPI3 329 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.96□□□□□ -1.29
USP48-206ENST00000464577 LIPKQ5VXJ0 399 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 ZDHHC20Q5W0Z9 365 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 LAMTOR1Q6IAA8 161 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 CXCL17Q6UXB2 119 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 ANGPTL8Q6UXH0 198 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 CASP12Q6UXS9 341 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 ZNF730Q6ZMV8 503 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 ZNF782Q6ZMW2 699 aaPredicted RBP6.96□□□□□ -1.29
USP48-206ENST00000464577 THOC6Q86W42 341 aaKnown RBP6.96□□□□□ -1.29
USP48-206ENST00000464577 PLA2G15Q8NCC3 412 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 GPR26Q8NDV2 337 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 C19orf18Q8NEA5 215 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 TRPV1Q8NER1 839 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 ANKK1Q8NFD2 765 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 OR4M1Q8NGD0 313 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 TMEM163Q8TC26 289 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 APOBEC4Q8WW27 367 aaKnown RBP6.96□□□□□ -1.29
USP48-206ENST00000464577 CLP1Q92989 425 aaKnown RBP6.96□□□□□ -1.29
USP48-206ENST00000464577 RNF166Q96A37 237 aaPredicted RBP6.96□□□□□ -1.29
USP48-206ENST00000464577 IL4I1Q96RQ9 567 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 MTERF1Q99551 399 aaKnown RBP6.96□□□□□ -1.29
USP48-206ENST00000464577 PPP1R3EQ9H7J1 279 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 NMRK2Q9NPI5 230 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 PAK6Q9NQU5 681 aaPredicted RBP6.96□□□□□ -1.29
USP48-206ENST00000464577 MRPL39Q9NYK5 338 aaKnown RBP6.96□□□□□ -1.29
USP48-206ENST00000464577 HCN2Q9UL51 889 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 NDRG2Q9UN36 371 aaKnown RBP6.96□□□□□ -1.29
USP48-206ENST00000464577 EXO1Q9UQ84 846 aaKnown RBP6.96□□□□□ -1.29
USP48-206ENST00000464577 IRGMA1A4Y4 181 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 E7EQ34 232 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 SGK494L7N484 410 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 WWP2O00308 870 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 ORC5O43913 435 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 GPR37L1O60883 481 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 ETHE1O95571 254 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 C6orf47O95873 294 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 FHP07954 510 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 GSTM1P09488 218 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 SLC2A2P11168 524 aaPredicted RBP6.96□□□□□ -1.3
USP48-206ENST00000464577 CYP2A6P11509 494 aaPredicted RBP6.96□□□□□ -1.3
USP48-206ENST00000464577 ZNF8P17098 575 aaPredicted RBP6.96□□□□□ -1.3
USP48-206ENST00000464577 MYL12AP19105 171 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 GSTM5P46439 218 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 STK19P49842 368 aaPredicted RBP6.96□□□□□ -1.3
USP48-206ENST00000464577 MXD1Q05195 221 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 ZNF763Q0D2J5 394 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 HSPA14Q0VDF9 509 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 DUSP4Q13115 394 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 TPBGQ13641 420 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 DDX39BQ13838 428 aaKnown RBP6.96□□□□□ -1.3
USP48-206ENST00000464577 GANABQ14697 944 aaKnown RBP6.96□□□□□ -1.3
USP48-206ENST00000464577 HEPACAMQ14CZ8 416 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 ANGPT1Q15389 498 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 SF3A2Q15428 464 aaKnown RBP6.96□□□□□ -1.3
USP48-206ENST00000464577 DUSP6Q16828 381 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 C22orf42Q6IC83 251 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 PAMR1Q6UXH9 720 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 QSOX2Q6ZRP7 698 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 ANKS3Q6ZW76 656 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 DEFB132Q7Z7B7 95 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 VRK3Q8IV63 474 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 FAM217AQ8IXS0 508 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 FAM26EQ8N5C1 309 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 OR52I1Q8NGK6 324 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.96□□□□□ -1.3
USP48-206ENST00000464577 SKA2Q8WVK7 121 aaPredicted RBP6.96□□□□□ -1.3
USP48-206ENST00000464577 DNAJA4Q8WW22 397 aaPredicted RBP6.96□□□□□ -1.3
USP48-206ENST00000464577 ALG14Q96F25 216 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 HYLS1Q96M11 299 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 CITED4Q96RK1 184 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 ZIC5Q96T25 663 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 MARVELD1Q9BSK0 173 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 ZNF717Q9BY31 904 aaPredicted RBP6.96□□□□□ -1.3
USP48-206ENST00000464577 POLDIP3Q9BY77 421 aaKnown RBP6.96□□□□□ -1.3
USP48-206ENST00000464577 TM6SF2Q9BZW4 377 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 ATG10Q9H0Y0 220 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 SGK2Q9HBY8 427 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 GULP1Q9UBP9 304 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 TESQ9UGI8 421 aaKnown RBP6.96□□□□□ -1.3
USP48-206ENST00000464577 TMPRSS11EQ9UL52 423 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 RAB23Q9ULC3 237 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 ASB4Q9Y574 426 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 PCDHB7Q9Y5E2 793 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 PLXNB3Q9ULL4 1909 aa6.96□□□□□ -1.3
USP48-206ENST00000464577 TRBV4-1A0A0J9YWV2 114 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms