RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 CEACAM19Q7Z692 300 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 CARNMT1Q8N4J0 409 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 SUMF1Q8NBK3 374 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 GPR148Q8TDV2 347 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 PKNOX2Q96KN3 472 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 ZNF559Q9BR84 538 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 NAPBQ9H115 298 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 ALDH8A1Q9H2A2 487 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-205ENST00000464541 PRR34Q9NV39 138 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 MGAT4AQ9UM21 535 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 MRPL11Q9Y3B7 192 aaKnown RBP4.63□□□□□ -1.67
PTCD3-205ENST00000464541 MAGEB1P43366 347 aa4.62□□□□□ -1.67
PTCD3-205ENST00000464541 KRTAP10-3P60369 221 aa4.62□□□□□ -1.67
PTCD3-205ENST00000464541 CCDC92Q53HC0 331 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-205ENST00000464541 EIPR1Q53HC9 387 aa4.62□□□□□ -1.67
PTCD3-205ENST00000464541 ZNF506Q5JVG8 444 aa4.62□□□□□ -1.67
PTCD3-205ENST00000464541 C1orf189Q5VU69 101 aa4.62□□□□□ -1.67
PTCD3-205ENST00000464541 GOLGA5Q8TBA6 731 aa4.62□□□□□ -1.67
PTCD3-205ENST00000464541 SPATA18Q8TC71 538 aa4.62□□□□□ -1.67
PTCD3-205ENST00000464541 GGHQ92820 318 aa4.62□□□□□ -1.67
PTCD3-205ENST00000464541 ERGIC2Q96RQ1 377 aa4.62□□□□□ -1.67
PTCD3-205ENST00000464541 GPR83Q9NYM4 423 aa4.62□□□□□ -1.67
PTCD3-205ENST00000464541 PLEK2Q9NYT0 353 aa4.62□□□□□ -1.67
PTCD3-205ENST00000464541 ZFP37Q9Y6Q3 630 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-205ENST00000464541 A0A1B0GTH9 108 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 LOC390937A0A1W2PQ73 354 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 RPL37AP8A6NKH3 93 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 H0YIG0 161 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 TTI1O43156 1089 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 B4GAT1O43505 415 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 HCKP08631 526 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 GP9P14770 177 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 OR1D2P34982 312 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 RPL34P49207 117 aaKnown RBP4.61□□□□□ -1.67
PTCD3-205ENST00000464541 PEX3P56589 373 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 STX1BP61266 288 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 RPS27AP62979 156 aaKnown RBP4.61□□□□□ -1.67
PTCD3-205ENST00000464541 SPHARQ15513 63 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 CCDC184Q52MB2 194 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 C1QTNF12Q5T7M4 302 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 RNLSQ5VYX0 342 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 BAIAP2L2Q6UXY1 529 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 ZSCAN30Q86W11 494 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 CCDC83Q8IWF9 413 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 SYCP3Q8IZU3 236 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 NUP93Q8N1F7 819 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 CHCHD4Q8N4Q1 142 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 GVQW1Q8N7I0 195 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 ZNF781Q8N8C0 355 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 TCP11Q8WWU5 503 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 AP2M1Q96CW1 435 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 JAKMIP1Q96N16 626 aaKnown RBP4.61□□□□□ -1.67
PTCD3-205ENST00000464541 GUCD1Q96NT3 240 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 PANX3Q96QZ0 392 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 SSX3Q99909 188 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 HSD17B14Q9BPX1 270 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 NUSAP1Q9BXS6 441 aaKnown RBP4.61□□□□□ -1.67
PTCD3-205ENST00000464541 RNPEPL1Q9HAU8 725 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 TEKT2Q9UIF3 430 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 ACEP12821 1306 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 SALL1Q9NSC2 1324 aa4.61□□□□□ -1.67
PTCD3-205ENST00000464541 A0A0U1RQK1 487 aa4.6□□□□□ -1.67
PTCD3-205ENST00000464541 ZNF320A2RRD8 509 aa4.6□□□□□ -1.67
PTCD3-205ENST00000464541 ZNF840PA6NDX5 716 aa4.6□□□□□ -1.67
PTCD3-205ENST00000464541 ZNF724A8MTY0 619 aa4.6□□□□□ -1.67
PTCD3-205ENST00000464541 CHUKO15111 745 aa4.6□□□□□ -1.67
PTCD3-205ENST00000464541 FHP07954 510 aa4.6□□□□□ -1.67
PTCD3-205ENST00000464541 GJB2P29033 226 aa4.6□□□□□ -1.67
PTCD3-205ENST00000464541 STXBP2Q15833 593 aa4.6□□□□□ -1.67
PTCD3-205ENST00000464541 CAPN13Q6MZZ7 669 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-205ENST00000464541 CD164L2Q6UWJ8 174 aa4.6□□□□□ -1.67
PTCD3-205ENST00000464541 ZNF730Q6ZMV8 503 aa4.6□□□□□ -1.67
PTCD3-205ENST00000464541 ADCK1Q86TW2 530 aa4.6□□□□□ -1.67
PTCD3-205ENST00000464541 HPS6Q86YV9 775 aa4.6□□□□□ -1.67
PTCD3-205ENST00000464541 RUNDC3BQ96NL0 473 aa4.6□□□□□ -1.67
PTCD3-205ENST00000464541 S1PR3Q99500 378 aa4.6□□□□□ -1.67
PTCD3-205ENST00000464541 FAM120CQ9NX05 1096 aaKnown RBP4.6□□□□□ -1.67
PTCD3-205ENST00000464541 CLEC5AQ9NY25 188 aa4.6□□□□□ -1.67
PTCD3-205ENST00000464541 CPQQ9Y646 472 aa4.6□□□□□ -1.67
PTCD3-205ENST00000464541 A0A087WWV3 80 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 SLC7A4O43246 635 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 KIAA0513O60268 411 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 NME6O75414 186 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-205ENST00000464541 OR6A2O95222 327 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 SEMA4FO95754 770 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 GLRA1P23415 457 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 ATP5DP30049 168 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 HCFC1P51610 2035 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 KIAA1217Q5T5P2 1943 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 LIPJQ5W064 366 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 REG3GQ6UW15 175 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 SH2D6Q7Z4S9 175 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 ASPGQ86U10 573 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 LAX1Q8IWV1 398 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 THEM5Q8N1Q8 247 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 CCDC197Q8NCU1 140 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 OR4Q3Q8NH05 313 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 PRCCQ92733 491 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-205ENST00000464541 CDHR1Q96JP9 859 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 RAB40CQ96S21 281 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms