RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 PCP11498 1178 aaKnown RBP3.96□□□□□ -1.78
USP25-207ENST00000464435 GLRA1P23415 457 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 PDHA2P29803 388 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 SFNP31947 248 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 NSFP46459 744 aaKnown RBP3.96□□□□□ -1.78
USP25-207ENST00000464435 CCR4P51679 360 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 GEMP55040 296 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 CYCSP99999 105 aaKnown RBP3.96□□□□□ -1.78
USP25-207ENST00000464435 GABPAQ06546 454 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 MFGE8Q08431 387 aaPredicted RBP3.96□□□□□ -1.78
USP25-207ENST00000464435 TSTA3Q13630 321 aaPredicted RBP3.96□□□□□ -1.78
USP25-207ENST00000464435 MEF2DQ14814 521 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 FCN2Q15485 313 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 OR1C1Q15619 314 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 CT45A2Q5DJT8 189 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 NEPROQ6NW34 567 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 AQP11Q8NBQ7 271 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 LIPHQ8WWY8 451 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 TAF4BQ92750 862 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 ATXN7L3BQ96GX2 97 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 NSMCE3Q96MG7 304 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 RUNDC3BQ96NL0 473 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 KRT12Q99456 494 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 PKP2Q99959 881 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 ACOXLQ9NUZ1 547 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 BARHL2Q9NY43 387 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 KLK11Q9UBX7 282 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 BAIAP2L1Q9UHR4 511 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 MRTO4Q9UKD2 239 aaKnown RBP3.96□□□□□ -1.78
USP25-207ENST00000464435 MTF2Q9Y483 593 aaPredicted RBP3.96□□□□□ -1.78
USP25-207ENST00000464435 WIPI2Q9Y4P8 454 aa3.96□□□□□ -1.78
USP25-207ENST00000464435 UMODL1Q5DID0 1318 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 TRIM64CA6NLI5 447 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 RNF103O00237 685 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 GSTA2P09210 222 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 HSD17B7P56937 341 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 DCAF12Q5T6F0 453 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 WLSQ5T9L3 541 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 NKAIN2Q5VXU1 208 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 ZNF730Q6ZMV8 503 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 WDR88Q6ZMY6 472 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 ZNF614Q8N883 585 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 C8orf46Q8TAG6 207 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 IWS1Q96ST2 819 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 FUNDC2Q9BWH2 189 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 DDX47Q9H0S4 455 aaKnown RBP3.95□□□□□ -1.78
USP25-207ENST00000464435 SIRPDQ9H106 197 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 IL1RAPQ9NPH3 570 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 B3GAT2Q9NPZ5 323 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 SPASTQ9UBP0 616 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 TSPAN16Q9UKR8 245 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 DNPEPQ9ULA0 475 aa3.95□□□□□ -1.78
USP25-207ENST00000464435 DIMT1Q9UNQ2 313 aaKnown RBP3.95□□□□□ -1.78
USP25-207ENST00000464435 EXOGQ9Y2C4 368 aaKnown RBP3.95□□□□□ -1.78
USP25-207ENST00000464435 A0A0U1RRA0 63 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 RNF103-CHMP3A0A140T963 221 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 TCP10L2B9ZVM9 353 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 CSO75390 466 aaKnown RBP3.94□□□□□ -1.78
USP25-207ENST00000464435 STAM2O75886 525 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 TXNDC12O95881 172 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 CXCL10P02778 98 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 TPM2P07951 284 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 SFTPBP07988 381 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 AOC1P19801 751 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 MARCKSP29966 332 aaPredicted RBP3.94□□□□□ -1.78
USP25-207ENST00000464435 STIP1P31948 543 aaKnown RBP3.94□□□□□ -1.78
USP25-207ENST00000464435 TNFRSF4P43489 277 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 FHITP49789 147 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 LIMK2P53671 638 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 GSCP56915 257 aaPredicted RBP3.94□□□□□ -1.78
USP25-207ENST00000464435 POLR2FP61218 127 aaKnown RBP3.94□□□□□ -1.78
USP25-207ENST00000464435 HSPA14Q0VDF9 509 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 RFTN2Q52LD8 501 aaPredicted RBP3.94□□□□□ -1.78
USP25-207ENST00000464435 TAF1BQ53T94 588 aaPredicted RBP3.94□□□□□ -1.78
USP25-207ENST00000464435 ZCCHC12Q6PEW1 402 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 MFSD7Q6UXD7 560 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 ISLR2Q6UXK2 745 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 ITIH5Q86UX2 942 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 OR4N5Q8IXE1 308 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 PARP8Q8N3A8 854 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 MRPL43Q8N983 215 aaKnown RBP3.94□□□□□ -1.78
USP25-207ENST00000464435 RELL2Q8NC24 303 aaPredicted RBP3.94□□□□□ -1.78
USP25-207ENST00000464435 OR6M1Q8NGM8 313 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 N4BP2L2Q92802 583 aaPredicted RBP3.94□□□□□ -1.78
USP25-207ENST00000464435 MRPL24Q96A35 216 aaKnown RBP3.94□□□□□ -1.78
USP25-207ENST00000464435 ESAMQ96AP7 390 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 RAB39BQ96DA2 213 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 GPR137Q96N19 417 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 TAAR6Q96RI8 345 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 RAB40CQ96S21 281 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 ANP32EQ9BTT0 268 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 PINK1Q9BXM7 581 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 MARCH7Q9H992 704 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 HPF1Q9NWY4 346 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 TEX10Q9NXF1 929 aaPredicted RBP3.94□□□□□ -1.78
USP25-207ENST00000464435 COPS7AQ9UBW8 275 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 FAM153AQ9UHL3 310 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 TEKT2Q9UIF3 430 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 BLOC1S6Q9UL45 172 aa3.94□□□□□ -1.78
USP25-207ENST00000464435 PIN4Q9Y237 131 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms