RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ISLR2Q6UXK2 745 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 RIPOR1Q6ZS17 1223 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 CUZD1Q86UP6 607 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 HPS6Q86YV9 775 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 ZADH2Q8N4Q0 377 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 CDYL2Q8N8U2 506 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 ADAMTS18Q8TE60 1221 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 TM9SF4Q92544 642 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 SERPINI1Q99574 410 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 MRPS33Q9Y291 106 aaKnown RBP15.97■□□□□ 0.15
VPS52-215ENST00000464425 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.97■□□□□ 0.15
VPS52-215ENST00000464425 TCRBV16S1A1N1A0A5B0 115 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 SERTM1A2A2V5 107 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 TGFBR3LH3BV60 316 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 ULK1O75385 1050 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 EEDO75530 441 aaKnown RBP15.96■□□□□ 0.15
VPS52-215ENST00000464425 PDYNP01213 254 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 CHRNGP07510 517 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 UROSP10746 265 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 CPN2P22792 545 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 ARRB2P32121 409 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 BSGP35613 385 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 SLC1A6P48664 564 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 ARFIP1P53367 373 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 HSD17B7P56937 341 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 ABCE1P61221 599 aaKnown RBP15.96■□□□□ 0.15
VPS52-215ENST00000464425 TLE1Q04724 770 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 PLEKHN1Q494U1 663 aaPredicted RBP15.96■□□□□ 0.15
VPS52-215ENST00000464425 CRB2Q5IJ48 1285 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 TCHHL1Q5QJ38 904 aaPredicted RBP15.96■□□□□ 0.15
VPS52-215ENST00000464425 ATG16L1Q676U5 607 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 SLC6A19Q695T7 634 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 SCUBE1Q8IWY4 988 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 ZNF595Q8IYB9 648 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 ARFGAP2Q8N6H7 521 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 EFCAB3Q8N7B9 438 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 SELENOMQ8WWX9 145 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 ZNF717Q9BY31 904 aaPredicted RBP15.96■□□□□ 0.15
VPS52-215ENST00000464425 MANSC1Q9H8J5 431 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 BRF2Q9HAW0 419 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 PNO1Q9NRX1 252 aaKnown RBP15.96■□□□□ 0.15
VPS52-215ENST00000464425 INTS9Q9NV88 658 aaKnown RBP15.96■□□□□ 0.15
VPS52-215ENST00000464425 CSAG2Q9Y5P2 127 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 SPACA6W5XKT8 324 aa15.96■□□□□ 0.15
VPS52-215ENST00000464425 TTLL8A6PVC2 850 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 MANBAO00462 879 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 AZIN1O14977 448 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 CTNSO60931 367 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 GBAP04062 536 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 HSD3B1P14060 373 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 HSD3B2P26439 372 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 PPP2R1BP30154 601 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 HMOX2P30519 316 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 MLLT10P55197 1068 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 SLC26A5P58743 744 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 AP2B1P63010 937 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 ID2Q02363 134 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 MFAP5Q13361 173 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 EXT1Q16394 746 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 FCRLBQ6BAA4 426 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 CYP20A1Q6UW02 462 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 RNF165Q6ZSG1 346 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 GPR180Q86V85 440 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 KIRREL3Q8IZU9 778 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 CLYBLQ8N0X4 340 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 ZCCHC7Q8N3Z6 543 aaKnown RBP15.95■□□□□ 0.14
VPS52-215ENST00000464425 M1APQ8TC57 530 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 LMF1Q96S06 567 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 HBEGFQ99075 208 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 EPS8L2Q9H6S3 715 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 KCNK13Q9HB14 408 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 MMP25Q9NPA2 562 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 SLAMF7Q9NQ25 335 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 THAP1Q9NVV9 213 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 PLA2G3Q9NZ20 509 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 HAO1Q9UJM8 370 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 SLC12A4Q9UP95 1085 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 TRAF6Q9Y4K3 522 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 ATG4BQ9Y4P1 393 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 CLDN16Q9Y5I7 305 aa15.95■□□□□ 0.14
VPS52-215ENST00000464425 A0A0A6YYD5 115 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 J3QKU1 62 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 ITM2AO43736 263 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 TMPRSS11DO60235 418 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 LDB3O75112 727 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 SNNO75324 88 aaPredicted RBP15.94■□□□□ 0.14
VPS52-215ENST00000464425 PRKRAO75569 313 aaKnown RBP15.94■□□□□ 0.14
VPS52-215ENST00000464425 CRCPO75575 148 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 MYO1DO94832 1006 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 HSPA4LO95757 839 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 F10P00742 488 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 SOX11P35716 441 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 TSFMP43897 325 aaKnown RBP15.94■□□□□ 0.14
VPS52-215ENST00000464425 FOXA1P55317 472 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 HNRNPH2P55795 449 aaKnown RBP15.94■□□□□ 0.14
VPS52-215ENST00000464425 BST1Q10588 318 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 STX4Q12846 297 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 KANK2Q63ZY3 851 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 C18orf63Q68DL7 685 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 IGFL2Q6UWQ7 119 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms