RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 TBL3Q12788 808 aaKnown RBP15.96■□□□□ 0.15
HMGN1-210ENST00000464078 STX4Q12846 297 aa15.96■□□□□ 0.15
HMGN1-210ENST00000464078 TRMT10BQ6PF06 316 aaKnown RBP15.96■□□□□ 0.15
HMGN1-210ENST00000464078 ADGRD1Q6QNK2 874 aa15.96■□□□□ 0.15
HMGN1-210ENST00000464078 WDR53Q7Z5U6 358 aaPredicted RBP15.96■□□□□ 0.15
HMGN1-210ENST00000464078 FBXW8Q8N3Y1 598 aa15.96■□□□□ 0.15
HMGN1-210ENST00000464078 ZNF321PQ8N8H1 164 aa15.96■□□□□ 0.15
HMGN1-210ENST00000464078 C7orf57Q8NEG2 295 aa15.96■□□□□ 0.15
HMGN1-210ENST00000464078 NUBPLQ8TB37 319 aa15.96■□□□□ 0.15
HMGN1-210ENST00000464078 LYRM4Q9HD34 91 aa15.96■□□□□ 0.15
HMGN1-210ENST00000464078 RYDENQ9NUL5 291 aaKnown RBP15.96■□□□□ 0.15
HMGN1-210ENST00000464078 CRIM1Q9NZV1 1036 aa15.96■□□□□ 0.15
HMGN1-210ENST00000464078 SPRR3Q9UBC9 169 aa15.96■□□□□ 0.15
HMGN1-210ENST00000464078 COPS7AQ9UBW8 275 aa15.96■□□□□ 0.15
HMGN1-210ENST00000464078 RPH3AQ9Y2J0 694 aaPredicted RBP15.96■□□□□ 0.15
HMGN1-210ENST00000464078 TRGV5A0A0B4J1U4 118 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 ANKDD1BA6NHY2 528 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 SYT5O00445 386 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 DNASE1P24855 282 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 KCNC1P48547 511 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 PPP1R7Q15435 360 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 TSNQ15631 228 aaKnown RBP15.95■□□□□ 0.14
HMGN1-210ENST00000464078 ZNF791Q3KP31 576 aaPredicted RBP15.95■□□□□ 0.14
HMGN1-210ENST00000464078 FBXL19-AS1Q494R0 122 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 FLYWCH1Q4VC44 716 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 FRA10AC1Q70Z53 315 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 CAMKMTQ7Z624 323 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 ZC3HC1Q86WB0 502 aaKnown RBP15.95■□□□□ 0.14
HMGN1-210ENST00000464078 MMP21Q8N119 569 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 FAM222BQ8WU58 562 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 SLCO2A1Q92959 643 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 WDR34Q96EX3 536 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 KCNC2Q96PR1 638 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 SH3GL2Q99962 352 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 WDR83Q9BRX9 315 aaKnown RBP15.95■□□□□ 0.14
HMGN1-210ENST00000464078 CNPPD1Q9BV87 410 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 ROGDIQ9GZN7 287 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 LDAHQ9H6V9 325 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 SEMA4BQ9NPR2 832 aaPredicted RBP15.95■□□□□ 0.14
HMGN1-210ENST00000464078 PRDM7Q9NQW5 492 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 QPCTLQ9NXS2 382 aa15.95■□□□□ 0.14
HMGN1-210ENST00000464078 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.95■□□□□ 0.14
HMGN1-210ENST00000464078 NCKAP5O14513 1909 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 GOLGA6L10A0A0M3HER8 536 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 A6NNC1 897 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 HSPB2A8KAH6 182 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 SCELO95171 688 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 ETHE1O95571 254 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 IGKV3-11P04433 115 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 GGT5P36269 586 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 ASCL1P50553 236 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 IGLV3-21P80748 117 aaPredicted RBP15.94■□□□□ 0.14
HMGN1-210ENST00000464078 HSPB2Q16082 182 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 C18orf21Q32NC0 220 aaPredicted RBP15.94■□□□□ 0.14
HMGN1-210ENST00000464078 PIGGQ5H8A4 983 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 ADNP2Q6IQ32 1131 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 CDC20BQ86Y33 519 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 ULK2Q8IYT8 1036 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 PDIK1LQ8N165 341 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 LRRC25Q8N386 305 aaPredicted RBP15.94■□□□□ 0.14
HMGN1-210ENST00000464078 TCAIMQ8N3R3 496 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 RELL2Q8NC24 303 aaPredicted RBP15.94■□□□□ 0.14
HMGN1-210ENST00000464078 ACTRT1Q8TDG2 376 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 PAQR8Q8TEZ7 354 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 ZNF721Q8TF20 911 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 ANKRD49Q8WVL7 239 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 SREK1Q8WXA9 508 aaKnown RBP15.94■□□□□ 0.14
HMGN1-210ENST00000464078 LRRC39Q96DD0 335 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 EFCAB11Q9BUY7 163 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 POPDC3Q9HBV1 291 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 ACKR4Q9NPB9 350 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 CTNNAL1Q9UBT7 734 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 ASIC3Q9UHC3 531 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 BOKQ9UMX3 212 aaPredicted RBP15.94■□□□□ 0.14
HMGN1-210ENST00000464078 PLEKHA6Q9Y2H5 1048 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 PSAT1Q9Y617 370 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 JMJD1CQ15652 2540 aa15.94■□□□□ 0.14
HMGN1-210ENST00000464078 VPS13CQ709C8 3753 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 FAM95CA0A1B0GW59 222 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 LRRC3CA6NJW4 275 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 PRAMEF4O60810 478 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 LDB3O75112 727 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 DRD2P14416 443 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 PIGAP37287 484 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 ELK3P41970 407 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 TAS2R39P59534 338 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 ADAM8P78325 824 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 ZNF460Q14592 562 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 TGFBIQ15582 683 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 CDKL4Q5MAI5 379 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 PRAMEF9Q5VWM5 478 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 SLC22A10Q63ZE4 541 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 LYPD8Q6UX82 237 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 PAMR1Q6UXH9 720 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 SEM1Q6ZVN7 128 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 DND1Q8IYX4 353 aaKnown RBP15.93■□□□□ 0.14
HMGN1-210ENST00000464078 SLC15A4Q8N697 577 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 SRFBP1Q8NEF9 429 aaKnown RBP15.93■□□□□ 0.14
HMGN1-210ENST00000464078 NEIL3Q8TAT5 605 aa15.93■□□□□ 0.14
HMGN1-210ENST00000464078 SLC22A8Q8TCC7 542 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms