RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 OR2W5A6NFC9 320 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 TMEM233B4DJY2 109 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 PIP5K1BO14986 540 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 ITM2AO43736 263 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 DYRK3O43781 588 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 SEC22BO75396 215 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 ALPPP05187 535 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 LINC00032P0C843 101 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 COX7A2P14406 83 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 NR1D1P20393 614 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 ITGA3P26006 1051 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 CCL11P51671 97 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 CHAF1BQ13112 559 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 NDUFAF5Q5TEU4 345 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 CPZQ66K79 652 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 LSM14AQ8ND56 463 aaKnown RBP18.58■□□□□ 0.56
COL9A3-204ENST00000463487 APIPQ96GX9 242 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 PPP3R2Q96LZ3 170 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 PELOQ9BRX2 385 aaKnown RBP18.58■□□□□ 0.56
COL9A3-204ENST00000463487 NECTIN3Q9NQS3 549 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 PSME2Q9UL46 239 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 TMED5Q9Y3A6 229 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 CFAP47Q6ZTR5 3102 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 NPIPB8E9PQR5 432 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 KLF11O14901 512 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 SKAP2O75563 359 aaPredicted RBP18.57■□□□□ 0.56
COL9A3-204ENST00000463487 SEC24DO94855 1032 aaPredicted RBP18.57■□□□□ 0.56
COL9A3-204ENST00000463487 AIFM1O95831 613 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 IFNA16P05015 189 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 ANXA4P09525 319 aaPredicted RBP18.57■□□□□ 0.56
COL9A3-204ENST00000463487 MAPK1P28482 360 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 ARRB2P32121 409 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 ZNF763Q0D2J5 394 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 KCNAB2Q13303 367 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 HEPACAMQ14CZ8 416 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 PCOLCEQ15113 449 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 TERF2Q15554 542 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 UGT3A2Q3SY77 523 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 ATP6AP1LQ52LC2 224 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 C18orf63Q68DL7 685 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 PAPD4Q6PIY7 484 aaKnown RBP18.57■□□□□ 0.56
COL9A3-204ENST00000463487 RIPOR1Q6ZS17 1223 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 CLNKQ7Z7G1 428 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 GALNT16Q8N428 558 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 ARFGAP2Q8N6H7 521 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 ZNF781Q8N8C0 355 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 LRRC8CQ8TDW0 803 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 C19orf60Q96EN9 201 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 ADAP2Q9NPF8 381 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 GPR83Q9NYM4 423 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 HAO1Q9UJM8 370 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 WBP11Q9Y2W2 641 aaKnown RBP18.57■□□□□ 0.56
COL9A3-204ENST00000463487 LAMA5O15230 3695 aa18.57■□□□□ 0.56
COL9A3-204ENST00000463487 A0A1W2PR48 441 aa18.56■□□□□ 0.56
COL9A3-204ENST00000463487 SLCO1B7G3V0H7 640 aa18.56■□□□□ 0.56
COL9A3-204ENST00000463487 HNRNPFP52597 415 aaKnown RBP18.56■□□□□ 0.56
COL9A3-204ENST00000463487 EFNA3P52797 238 aa18.56■□□□□ 0.56
COL9A3-204ENST00000463487 SOX8P57073 446 aa18.56■□□□□ 0.56
COL9A3-204ENST00000463487 PLIN5Q00G26 463 aa18.56■□□□□ 0.56
COL9A3-204ENST00000463487 ELAVL1Q15717 326 aaKnown RBP18.56■□□□□ 0.56
COL9A3-204ENST00000463487 BTBD16Q32M84 506 aa18.56■□□□□ 0.56
COL9A3-204ENST00000463487 FAM219BQ5XKK7 198 aa18.56■□□□□ 0.56
COL9A3-204ENST00000463487 PLAG1Q6DJT9 500 aa18.56■□□□□ 0.56
COL9A3-204ENST00000463487 JMJD6Q6NYC1 403 aaPredicted RBP18.56■□□□□ 0.56
COL9A3-204ENST00000463487 SHISA5Q8N114 240 aa18.56■□□□□ 0.56
COL9A3-204ENST00000463487 TMEM52Q8NDY8 209 aa18.56■□□□□ 0.56
COL9A3-204ENST00000463487 DAZLQ92904 295 aaKnown RBP18.56■□□□□ 0.56
COL9A3-204ENST00000463487 DGAT2Q96PD7 388 aa18.56■□□□□ 0.56
COL9A3-204ENST00000463487 SLC25A23Q9BV35 468 aa18.56■□□□□ 0.56
COL9A3-204ENST00000463487 ALOXE3Q9BYJ1 711 aa18.56■□□□□ 0.56
COL9A3-204ENST00000463487 LHPPQ9H008 270 aa18.56■□□□□ 0.56
COL9A3-204ENST00000463487 TUBB1Q9H4B7 451 aa18.56■□□□□ 0.56
COL9A3-204ENST00000463487 PNO1Q9NRX1 252 aaKnown RBP18.56■□□□□ 0.56
COL9A3-204ENST00000463487 TEX10Q9NXF1 929 aaPredicted RBP18.56■□□□□ 0.56
COL9A3-204ENST00000463487 PCDHGA9Q9Y5G4 932 aaKnown RBP18.56■□□□□ 0.56
COL9A3-204ENST00000463487 PTGDR2Q9Y5Y4 395 aa18.56■□□□□ 0.56
COL9A3-204ENST00000463487 CLCA3PQ9Y6N3 262 aa18.56■□□□□ 0.56
COL9A3-204ENST00000463487 ZZEF1O43149 2961 aa18.56■□□□□ 0.56
COL9A3-204ENST00000463487 SAGE2PA6NJ88 616 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 A6NL46 340 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 LSM1O15116 133 aaKnown RBP18.55■□□□□ 0.56
COL9A3-204ENST00000463487 LDB3O75112 727 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 SNNO75324 88 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-204ENST00000463487 SERPINA7P05543 415 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 FAM87AP0C7U9 286 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 DRD2P14416 443 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 PIK3R1P27986 724 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 HK2P52789 917 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 TAS2R50P59544 299 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 FOLH1Q04609 750 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 MYBPC3Q14896 1274 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 PDCD2Q16342 344 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-204ENST00000463487 LINC00303Q3SY05 128 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 GALNTL6Q49A17 601 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 CES4AQ5XG92 561 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 NOXRED1Q6NXP6 359 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 PARP9Q8IXQ6 854 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 SAMD14Q8IZD0 417 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-204ENST00000463487 TMEM132CQ8N3T6 1108 aa18.55■□□□□ 0.56
COL9A3-204ENST00000463487 C9orf43Q8TAL5 461 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms