RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 CCDC77Q9BR77 488 aa7.08□□□□□ -1.28
SMC3-202ENST00000462899 IL22Q9GZX6 179 aa7.08□□□□□ -1.28
SMC3-202ENST00000462899 KLHL31Q9H511 634 aa7.08□□□□□ -1.28
SMC3-202ENST00000462899 LDAHQ9H6V9 325 aa7.08□□□□□ -1.28
SMC3-202ENST00000462899 ADAP2Q9NPF8 381 aa7.08□□□□□ -1.28
SMC3-202ENST00000462899 EIF2B3Q9NR50 452 aaKnown RBP7.08□□□□□ -1.28
SMC3-202ENST00000462899 ZNHIT6Q9NWK9 470 aaKnown RBP7.08□□□□□ -1.28
SMC3-202ENST00000462899 SYBUQ9NX95 663 aa7.08□□□□□ -1.28
SMC3-202ENST00000462899 ZFP69BQ9UJL9 534 aa7.08□□□□□ -1.28
SMC3-202ENST00000462899 DHRS7Q9Y394 339 aa7.08□□□□□ -1.28
SMC3-202ENST00000462899 TESMINQ9Y4I5 508 aa7.08□□□□□ -1.28
SMC3-202ENST00000462899 GRID2IPA4D2P6 1211 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 SH3D21A4FU49 640 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 GOLGA6L9A6NEM1 432 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 CD8B2A6NJW9 211 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 E5RI56 91 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 OR1F1O43749 312 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 LIASO43766 372 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 CNOT4O95628 575 aaKnown RBP7.07□□□□□ -1.28
SMC3-202ENST00000462899 TBX6O95947 436 aaPredicted RBP7.07□□□□□ -1.28
SMC3-202ENST00000462899 APRTP07741 180 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 F7P08709 466 aaPredicted RBP7.07□□□□□ -1.28
SMC3-202ENST00000462899 ETS1P14921 441 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 BMP7P18075 431 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 CTSSP25774 331 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 LOXP28300 417 aaPredicted RBP7.07□□□□□ -1.28
SMC3-202ENST00000462899 STIP1P31948 543 aaKnown RBP7.07□□□□□ -1.28
SMC3-202ENST00000462899 GRK3P35626 688 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 PIGAP37287 484 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 CCR8P51685 355 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 SESN2P58004 480 aaPredicted RBP7.07□□□□□ -1.28
SMC3-202ENST00000462899 RAB8AP61006 207 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 RNF4P78317 190 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 REEP5Q00765 189 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 RGS1Q08116 209 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 TBX2Q13207 712 aaPredicted RBP7.07□□□□□ -1.28
SMC3-202ENST00000462899 CTBP1Q13363 440 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 NAE1Q13564 534 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 RUNX2Q13950 521 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 ELAVL1Q15717 326 aaKnown RBP7.07□□□□□ -1.28
SMC3-202ENST00000462899 PHKG1Q16816 387 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 TTLL9Q3SXZ7 439 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 NHSL2Q5HYW2 709 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 CES3Q6UWW8 571 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 HSDL2Q6YN16 418 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 CPNE9Q8IYJ1 553 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 OR56A3Q8NH54 315 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 PTPMT1Q8WUK0 201 aaPredicted RBP7.07□□□□□ -1.28
SMC3-202ENST00000462899 ISL2Q96A47 359 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 GPR21Q99679 349 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 TIMP4Q99727 224 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 YIPF4Q9BSR8 244 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 UBQLN3Q9H347 655 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 ZFP64Q9NPA5 681 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 PNO1Q9NRX1 252 aaKnown RBP7.07□□□□□ -1.28
SMC3-202ENST00000462899 INTS10Q9NVR2 710 aaKnown RBP7.07□□□□□ -1.28
SMC3-202ENST00000462899 ALKBH4Q9NXW9 302 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 GALNT8Q9NY28 637 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 SAMD15Q9P1V8 674 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 ADGRE2Q9UHX3 823 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 SOX13Q9UN79 622 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 PCDHA13Q9Y5I0 950 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 CHCHD2Q9Y6H1 151 aaPredicted RBP7.07□□□□□ -1.28
SMC3-202ENST00000462899 IKBKGQ9Y6K9 419 aa7.07□□□□□ -1.28
SMC3-202ENST00000462899 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.07□□□□□ -1.28
SMC3-202ENST00000462899 BTNL10A8MVZ5 291 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 PSMD12O00232 456 aaPredicted RBP7.06□□□□□ -1.28
SMC3-202ENST00000462899 CYR61O00622 381 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 P04436 131 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 SOX18P35713 384 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 PTH2RP49190 550 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 PCYT1AP49585 367 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 RAB38P57729 211 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 TPM4P67936 248 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 DUSP8Q13202 625 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 SP140Q13342 867 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 SIX1Q15475 284 aaPredicted RBP7.06□□□□□ -1.28
SMC3-202ENST00000462899 MPEG1Q2M385 716 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 PIGGQ5H8A4 983 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 DCST1Q5T197 706 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 HECTD2Q5U5R9 776 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 HEPHL1Q6MZM0 1159 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 HMBOX1Q6NT76 420 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 OPN5Q6U736 354 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 ADGRE4PQ86SQ3 457 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 SDCCAG8Q86SQ7 713 aaPredicted RBP7.06□□□□□ -1.28
SMC3-202ENST00000462899 C9orf106Q8NAJ2 232 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 MORN4Q8NDC4 146 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 ZNF721Q8TF20 911 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 NEIL2Q969S2 332 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 HSPBAP1Q96EW2 488 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 PERPQ96FX8 193 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 QRFPRQ96P65 431 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 CSF3RQ99062 836 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 HAUS8Q9BT25 410 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 NPLQ9BXD5 320 aaPredicted RBP7.06□□□□□ -1.28
SMC3-202ENST00000462899 EPB41L4BQ9H329 900 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 PRTFDC1Q9NRG1 225 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 VTI1BQ9UEU0 232 aa7.06□□□□□ -1.28
SMC3-202ENST00000462899 TRRAPQ9Y4A5 3859 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms