RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 FFAR3O14843 346 aa17.15■□□□□ 0.34
ATPAF2-202ENST00000462733 GPR42O15529 346 aa17.15■□□□□ 0.34
ATPAF2-202ENST00000462733 FKBP9O95302 570 aa17.15■□□□□ 0.34
ATPAF2-202ENST00000462733 SNAP29O95721 258 aa17.15■□□□□ 0.34
ATPAF2-202ENST00000462733 THRBP10828 461 aa17.15■□□□□ 0.34
ATPAF2-202ENST00000462733 SEPHS1P49903 392 aa17.15■□□□□ 0.34
ATPAF2-202ENST00000462733 CLDN8P56748 225 aa17.15■□□□□ 0.34
ATPAF2-202ENST00000462733 DCTN2Q13561 401 aaKnown RBP17.15■□□□□ 0.34
ATPAF2-202ENST00000462733 LIPJQ5W064 366 aa17.15■□□□□ 0.34
ATPAF2-202ENST00000462733 FCRL6Q6DN72 434 aa17.15■□□□□ 0.34
ATPAF2-202ENST00000462733 ZNF740Q8NDX6 193 aa17.15■□□□□ 0.34
ATPAF2-202ENST00000462733 ISOC1Q96CN7 298 aa17.15■□□□□ 0.34
ATPAF2-202ENST00000462733 DOK1Q99704 481 aa17.15■□□□□ 0.34
ATPAF2-202ENST00000462733 AIF1LQ9BQI0 150 aa17.15■□□□□ 0.34
ATPAF2-202ENST00000462733 PRM3Q9NNZ6 103 aa17.15■□□□□ 0.34
ATPAF2-202ENST00000462733 TOR4AQ9NXH8 423 aa17.15■□□□□ 0.34
ATPAF2-202ENST00000462733 SPAARA0A1B0GVQ0 90 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 D6RAR5 112 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 AGRPO00253 132 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 HAT1O14929 419 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 CDK4P11802 303 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 BCKDHAP12694 445 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 RPS6KA3P51812 740 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 HPCAP84074 193 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 ILKQ13418 452 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 ZIC1Q15915 447 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 SPANXN4Q5MJ08 99 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 TTC23Q5W5X9 447 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 GRHL2Q6ISB3 625 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 ZNF425Q6IV72 752 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 GPR180Q86V85 440 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 PAQR7Q86WK9 346 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 CALHM3Q86XJ0 350 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 FAM129CQ86XR2 697 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 ZDHHC13Q8IUH4 622 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 MSRB3Q8IXL7 192 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 C19orf47Q8N9M1 422 aaKnown RBP17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 L3MBTL4Q8NA19 623 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 OR4D9Q8NGE8 314 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 TESCQ96BS2 214 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 OR52E6Q96RD3 313 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 EFCAB11Q9BUY7 163 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 THUMPD3Q9BV44 507 aaKnown RBP17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 EHD1Q9H4M9 534 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 SOHLH2Q9NX45 425 aa17.14■□□□□ 0.33
ATPAF2-202ENST00000462733 KCNE1BA0A087WTH5 132 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 CXCR6O00574 342 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 UGDHO60701 494 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 JUNBP17275 347 aaPredicted RBP17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 DCKP27707 260 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 GRK3P35626 688 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 HMGCS1Q01581 520 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 PCDH1Q08174 1060 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 PAGE2BQ5JRK9 111 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 RBM48Q5RL73 367 aaKnown RBP17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 ZNF773Q6PK81 442 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 GLRX5Q86SX6 157 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 RCBTB1Q8NDN9 531 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 OR4K1Q8NGD4 311 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 LZICQ8WZA0 190 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 WDR34Q96EX3 536 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 SLC47A1Q96FL8 570 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 CMTM7Q96FZ5 175 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 ITCHQ96J02 903 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 FCRL4Q96PJ5 515 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 DPYSL5Q9BPU6 564 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 CPPED1Q9BRF8 314 aaPredicted RBP17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 PIF1Q9H611 641 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 SLC25A37Q9NYZ2 338 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 CDV3Q9UKY7 258 aaKnown RBP17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 IGHV5-10-1A0A0J9YXX1 117 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 OR2A25A4D2G3 310 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 TM4SF5O14894 197 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 JUPP14923 745 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 CSRP1P21291 193 aaKnown RBP17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 HNF4AP41235 474 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 ARL4DP49703 201 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 REEP5Q00765 189 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 E2F1Q01094 437 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 CLPPQ16740 277 aaPredicted RBP17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 HIST2H2ACQ16777 129 aaPredicted RBP17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 PHF19Q5T6S3 580 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 HIST2H2AA3Q6FI13 130 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 CLVS1Q8IUQ0 354 aaPredicted RBP17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 OFCC1Q8IZS5 231 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 KRT78Q8N1N4 520 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 TMEM132CQ8N3T6 1108 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 WDR48Q8TAF3 677 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 FIG4Q92562 907 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 FAM162AQ96A26 154 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 MTFMTQ96DP5 389 aaKnown RBP17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 CCDC74BQ96LY2 380 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 ACPTQ9BZG2 426 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 PAIP1Q9H074 479 aaKnown RBP17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 KAT8Q9H7Z6 458 aaKnown RBP17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 FAM60AQ9NP50 221 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 FARSBQ9NSD9 589 aaKnown RBP17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 ANKMY1Q9P2S6 941 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 ADGRE2Q9UHX3 823 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 PCDHGA1Q9Y5H4 931 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms