RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 PLIN5Q00G26 463 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 TNFRSF17Q02223 184 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 OC90Q02509 493 aaPredicted RBP8.98□□□□□ -0.97
PKP4-208ENST00000462335 STX3Q13277 289 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 PCLAFQ15004 111 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 PCOLCEQ15113 449 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 MEP1AQ16819 746 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 PLAG1Q6DJT9 500 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 ATG14Q6ZNE5 492 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 COMMD6Q7Z4G1 85 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 UBE3DQ7Z6J8 389 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 CUZD1Q86UP6 607 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 KIRREL3Q8IZU9 778 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 CLYBLQ8N0X4 340 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 METTL4Q8N3J2 472 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 C1orf52Q8N6N3 182 aaKnown RBP8.98□□□□□ -0.97
PKP4-208ENST00000462335 HORMAD2Q8N7B1 307 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 OR4K14Q8NGD5 310 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 DNAJB14Q8TBM8 379 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 AGR3Q8TD06 166 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 BRIX1Q8TDN6 353 aaKnown RBP8.98□□□□□ -0.97
PKP4-208ENST00000462335 DYDC1Q8WWB3 177 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 ART5Q96L15 291 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 LMF1Q96S06 567 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 MECRQ9BV79 373 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 NUDT9Q9BW91 350 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 ADAP2Q9NPF8 381 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 NECTIN3Q9NQS3 549 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.98□□□□□ -0.97
PKP4-208ENST00000462335 TRAF6Q9Y4K3 522 aa8.98□□□□□ -0.97
PKP4-208ENST00000462335 MYOCOSA0A1B0GUC4 107 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 TCRBV16S1A1N1A0A5B0 115 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 SAGE2PA6NJ88 616 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 GLOD5A6NK44 160 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 C17orf105B2RV13 164 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 C4orf51C9J302 202 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 CYR61O00622 381 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 PROM1O43490 865 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 PCDH7O60245 1069 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 EEDO75530 441 aaKnown RBP8.97□□□□□ -0.97
PKP4-208ENST00000462335 SNUPNO95149 360 aaKnown RBP8.97□□□□□ -0.97
PKP4-208ENST00000462335 SCELO95171 688 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 GPR75O95800 540 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 ANXA4P09525 319 aaPredicted RBP8.97□□□□□ -0.97
PKP4-208ENST00000462335 ALOX15P16050 662 aaPredicted RBP8.97□□□□□ -0.97
PKP4-208ENST00000462335 CREB1P16220 341 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 DDX5P17844 614 aaKnown RBP8.97□□□□□ -0.97
PKP4-208ENST00000462335 NR1D1P20393 614 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 GRK2P25098 689 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 BSGP35613 385 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 SOX8P57073 446 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 SNRPNP63162 240 aaKnown RBP8.97□□□□□ -0.97
PKP4-208ENST00000462335 HMGCS1Q01581 520 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 ID2Q02363 134 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 HEPACAMQ14CZ8 416 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 NR6A1Q15406 480 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 ELAVL1Q15717 326 aaKnown RBP8.97□□□□□ -0.97
PKP4-208ENST00000462335 CHI3L2Q15782 390 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 ARL13AQ5H913 290 aaPredicted RBP8.97□□□□□ -0.97
PKP4-208ENST00000462335 TCHHL1Q5QJ38 904 aaPredicted RBP8.97□□□□□ -0.97
PKP4-208ENST00000462335 SH2D4BQ5SQS7 431 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 C18orf63Q68DL7 685 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 CLEC6AQ6EIG7 209 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 OR52E8Q6IFG1 317 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 ZNF793Q6ZN11 406 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 ZCCHC23Q6ZST2 131 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 OR4N5Q8IXE1 308 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 ZNF843Q8N446 348 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 OR14A16Q8NHC5 309 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 VMP1Q96GC9 406 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 BBC3Q96PG8 261 aaPredicted RBP8.97□□□□□ -0.97
PKP4-208ENST00000462335 KCNA7Q96RP8 456 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 CSF3RQ99062 836 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 SMAD5Q99717 465 aaKnown RBP8.97□□□□□ -0.97
PKP4-208ENST00000462335 OR8D2Q9GZM6 311 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 AICDAQ9GZX7 198 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 TMBIM4Q9HC24 238 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 MMP25Q9NPA2 562 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 KCMF1Q9P0J7 381 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 ATG4BQ9Y4P1 393 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 MGAQ8IWI9 3026 aa8.97□□□□□ -0.97
PKP4-208ENST00000462335 PIEZO2Q9H5I5 2752 aa8.96□□□□□ -0.97
PKP4-208ENST00000462335 CFAP47Q6ZTR5 3102 aa8.96□□□□□ -0.97
PKP4-208ENST00000462335 MED13Q9UHV7 2174 aa8.96□□□□□ -0.97
PKP4-208ENST00000462335 ZFHX4Q86UP3 3567 aa8.96□□□□□ -0.97
PKP4-208ENST00000462335 A0A0A6YYD5 115 aa8.96□□□□□ -0.98
PKP4-208ENST00000462335 TRBV11-1A0A0K0K1C0 115 aa8.96□□□□□ -0.98
PKP4-208ENST00000462335 A0A1W2PR48 441 aa8.96□□□□□ -0.98
PKP4-208ENST00000462335 TMEM120BA0PK00 339 aa8.96□□□□□ -0.98
PKP4-208ENST00000462335 C1orf226A1L170 272 aa8.96□□□□□ -0.98
PKP4-208ENST00000462335 TMEM114B3SHH9 223 aa8.96□□□□□ -0.98
PKP4-208ENST00000462335 UBFD1O14562 309 aaKnown RBP8.96□□□□□ -0.98
PKP4-208ENST00000462335 TYROBPO43914 113 aa8.96□□□□□ -0.98
PKP4-208ENST00000462335 ERAL1O75616 437 aaKnown RBP8.96□□□□□ -0.98
PKP4-208ENST00000462335 CEACAM4O75871 244 aa8.96□□□□□ -0.98
PKP4-208ENST00000462335 ZFAND5O76080 213 aa8.96□□□□□ -0.98
PKP4-208ENST00000462335 ETHE1O95571 254 aa8.96□□□□□ -0.98
PKP4-208ENST00000462335 TBX6O95947 436 aaPredicted RBP8.96□□□□□ -0.98
PKP4-208ENST00000462335 SERPINE1P05121 402 aa8.96□□□□□ -0.98
PKP4-208ENST00000462335 LINC00032P0C843 101 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms