RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 IGLV3-21P80748 117 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-210ENST00000462125 PMP22Q01453 160 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 SRSF11Q05519 484 aaKnown RBP12.31□□□□□ -0.44
C9orf3-210ENST00000462125 STX4Q12846 297 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 BIKQ13323 160 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 TSNAXIP1Q2TAA8 658 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 TIFABQ6ZNK6 161 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 MAMDC2Q7Z304 686 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-210ENST00000462125 GALNTL5Q7Z4T8 443 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 CLNKQ7Z7G1 428 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 RNF175Q8N4F7 328 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 DAZLQ92904 295 aaKnown RBP12.31□□□□□ -0.44
C9orf3-210ENST00000462125 NCLNQ969V3 563 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 REPS1Q96D71 796 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 FRMD6Q96NE9 622 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 MTERF1Q99551 399 aaKnown RBP12.31□□□□□ -0.44
C9orf3-210ENST00000462125 NTMT1Q9BV86 223 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 ZNF717Q9BY31 904 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-210ENST00000462125 NOL11Q9H8H0 719 aaKnown RBP12.31□□□□□ -0.44
C9orf3-210ENST00000462125 DDX31Q9H8H2 851 aaKnown RBP12.31□□□□□ -0.44
C9orf3-210ENST00000462125 CPSF2Q9P2I0 782 aaKnown RBP12.31□□□□□ -0.44
C9orf3-210ENST00000462125 YARS2Q9Y2Z4 477 aaKnown RBP12.31□□□□□ -0.44
C9orf3-210ENST00000462125 RNF11Q9Y3C5 154 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 CLCA3PQ9Y6N3 262 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 SPACA6W5XKT8 324 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 SPTBN1Q01082 2364 aaKnown RBP12.31□□□□□ -0.44
C9orf3-210ENST00000462125 SVILO95425 2214 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 DOPEY1Q5JWR5 2465 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 TRIM49D1C9J1S8 452 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 SAP18O00422 153 aaKnown RBP12.3□□□□□ -0.44
C9orf3-210ENST00000462125 LDB3O75112 727 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 SH3BGRLO75368 114 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 SLC25A12O75746 678 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 CLDN9O95484 217 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 IFNA16P05015 189 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 SNRPAP09012 282 aaKnown RBP12.3□□□□□ -0.44
C9orf3-210ENST00000462125 SBK3P0C264 359 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 CPN2P22792 545 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 GCAP28676 217 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 SSR2P43308 183 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 PER3P56645 1201 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 RPS13P62277 151 aaKnown RBP12.3□□□□□ -0.44
C9orf3-210ENST00000462125 CPSF6Q16630 551 aaKnown RBP eCLIP12.3□□□□□ -0.44
C9orf3-210ENST00000462125 MAPKAPK3Q16644 382 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 LGSNQ5TDP6 509 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 MRM1Q6IN84 353 aaKnown RBP12.3□□□□□ -0.44
C9orf3-210ENST00000462125 ADGRD1Q6QNK2 874 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 LRIG3Q6UXM1 1119 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 TRMT10CQ7L0Y3 403 aaKnown RBP12.3□□□□□ -0.44
C9orf3-210ENST00000462125 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-210ENST00000462125 CROCCP2Q86T23 111 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 GPR180Q86V85 440 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 SIAH3Q8IW03 269 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 GSPT2Q8IYD1 628 aaKnown RBP12.3□□□□□ -0.44
C9orf3-210ENST00000462125 PTGR2Q8N8N7 351 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-210ENST00000462125 FAM98AQ8NCA5 519 aaKnown RBP12.3□□□□□ -0.44
C9orf3-210ENST00000462125 OR8K3Q8NH51 312 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 OR14A16Q8NHC5 309 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 UHMK1Q8TAS1 419 aaKnown RBP12.3□□□□□ -0.44
C9orf3-210ENST00000462125 TANKQ92844 425 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 PHF21BQ96EK2 531 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 GPR137Q96N19 417 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 MRPL57Q9BQC6 102 aaKnown RBP12.3□□□□□ -0.44
C9orf3-210ENST00000462125 CCDC77Q9BR77 488 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 CENPKQ9BS16 269 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 SORBS1Q9BX66 1292 aaKnown RBP12.3□□□□□ -0.44
C9orf3-210ENST00000462125 TXLNGYQ9BZA5 131 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 ZBTB26Q9HCK0 441 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 MYOTQ9UBF9 498 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 XPR1Q9UBH6 696 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 FBXW2Q9UKT8 454 aa12.3□□□□□ -0.44
C9orf3-210ENST00000462125 A1L4Q6 167 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 RIPK2O43353 540 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 PROM1O43490 865 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 PRKNO60260 465 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-210ENST00000462125 ITGA10O75578 1167 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 MLYCDO95822 493 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 BSGP35613 385 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 NEK2P51955 445 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 PHEXP78562 749 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 CBX1P83916 185 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 ALDH6A1Q02252 535 aaKnown RBP12.29□□□□□ -0.44
C9orf3-210ENST00000462125 DDX39BQ13838 428 aaKnown RBP12.29□□□□□ -0.44
C9orf3-210ENST00000462125 ZRSR2Q15696 482 aaKnown RBP12.29□□□□□ -0.44
C9orf3-210ENST00000462125 C10orf62Q5T681 223 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-210ENST00000462125 C1QL3Q5VWW1 255 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 HIST2H2BCQ6DN03 193 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 HSDL2Q6YN16 418 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 MYLK4Q86YV6 388 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-210ENST00000462125 OR52B6Q8NGF0 335 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 TMEM125Q96AQ2 219 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 C1QTNF3Q9BXJ4 246 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 MRPL46Q9H2W6 279 aaKnown RBP12.29□□□□□ -0.44
C9orf3-210ENST00000462125 RPF2Q9H7B2 306 aaKnown RBP12.29□□□□□ -0.44
C9orf3-210ENST00000462125 FETUBQ9UGM5 382 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 PHF11Q9UIL8 331 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 PCTPQ9UKL6 214 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 ZNF835Q9Y2P0 537 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 ATG4BQ9Y4P1 393 aa12.29□□□□□ -0.44
C9orf3-210ENST00000462125 ASB4Q9Y574 426 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms