RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 CTNSO60931 367 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 SEC22BO75396 215 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 GBAP04062 536 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 ACPPP15309 386 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 PPP2R1BP30154 601 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 TIA1P31483 386 aaKnown RBP eCLIP21.11■□□□□ 0.97
C9orf3-209ENST00000460573 HNRNPH2P55795 449 aaKnown RBP21.11■□□□□ 0.97
C9orf3-209ENST00000460573 POLE2P56282 527 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 OCRLQ01968 901 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 BTKQ06187 659 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 BIKQ13323 160 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 NR6A1Q15406 480 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 NSDHLQ15738 373 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 TMEM151BQ8IW70 566 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 SCUBE1Q8IWY4 988 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 TANKQ92844 425 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 PPP3R2Q96LZ3 170 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 CSF3RQ99062 836 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 SLC25A18Q9H1K4 315 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 ADNPQ9H2P0 1102 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 RPF2Q9H7B2 306 aaKnown RBP21.11■□□□□ 0.97
C9orf3-209ENST00000460573 LRTM1Q9HBL6 345 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 P4HTMQ9NXG6 502 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 TMED5Q9Y3A6 229 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 ATG4BQ9Y4P1 393 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 PIEZO2Q9H5I5 2752 aa21.1■□□□□ 0.97
C9orf3-209ENST00000460573 SLCO1B7G3V0H7 640 aa21.1■□□□□ 0.97
C9orf3-209ENST00000460573 PCDH7O60245 1069 aa21.1■□□□□ 0.97
C9orf3-209ENST00000460573 BTG2P78543 158 aa21.1■□□□□ 0.97
C9orf3-209ENST00000460573 SLC13A2Q13183 592 aa21.1■□□□□ 0.97
C9orf3-209ENST00000460573 ATP1A4Q13733 1029 aa21.1■□□□□ 0.97
C9orf3-209ENST00000460573 DEFB109BQ30KR1 87 aa21.1■□□□□ 0.97
C9orf3-209ENST00000460573 XKR7Q5GH72 579 aa21.1■□□□□ 0.97
C9orf3-209ENST00000460573 FAAH2Q6GMR7 532 aa21.1■□□□□ 0.97
C9orf3-209ENST00000460573 KIRREL2Q6UWL6 708 aa21.1■□□□□ 0.97
C9orf3-209ENST00000460573 OR11G2Q8NGC1 345 aa21.1■□□□□ 0.97
C9orf3-209ENST00000460573 CKAP2Q8WWK9 683 aa21.1■□□□□ 0.97
C9orf3-209ENST00000460573 WBP11Q9Y2W2 641 aaKnown RBP21.1■□□□□ 0.97
C9orf3-209ENST00000460573 PTGDR2Q9Y5Y4 395 aa21.1■□□□□ 0.97
C9orf3-209ENST00000460573 KALRNO60229 2985 aa21.09■□□□□ 0.97
C9orf3-209ENST00000460573 IGKV3D-11A0A0A0MRZ8 115 aa21.09■□□□□ 0.97
C9orf3-209ENST00000460573 GNG14A0A1W2PPG7 69 aa21.09■□□□□ 0.97
C9orf3-209ENST00000460573 A0A1W2PR48 441 aa21.09■□□□□ 0.97
C9orf3-209ENST00000460573 LSM1O15116 133 aaKnown RBP21.09■□□□□ 0.97
C9orf3-209ENST00000460573 SKAP2O75563 359 aaPredicted RBP21.09■□□□□ 0.97
C9orf3-209ENST00000460573 NR2F6P10588 404 aa21.09■□□□□ 0.97
C9orf3-209ENST00000460573 HK2P52789 917 aa21.09■□□□□ 0.97
C9orf3-209ENST00000460573 EFNA3P52797 238 aa21.09■□□□□ 0.97
C9orf3-209ENST00000460573 RAE1P78406 368 aaKnown RBP21.09■□□□□ 0.97
C9orf3-209ENST00000460573 KCNAB2Q13303 367 aa21.09■□□□□ 0.97
C9orf3-209ENST00000460573 KIAA0040Q15053 153 aa21.09■□□□□ 0.97
C9orf3-209ENST00000460573 NDUFAF7Q7L592 441 aa21.09■□□□□ 0.97
C9orf3-209ENST00000460573 CPEB2Q7Z5Q1 589 aaKnown RBP21.09■□□□□ 0.97
C9orf3-209ENST00000460573 ANKRD37Q7Z713 158 aa21.09■□□□□ 0.97
C9orf3-209ENST00000460573 APLFQ8IW19 511 aaPredicted RBP21.09■□□□□ 0.97
C9orf3-209ENST00000460573 TMEM52Q8NDY8 209 aa21.09■□□□□ 0.97
C9orf3-209ENST00000460573 OR2T11Q8NH01 316 aa21.09■□□□□ 0.97
C9orf3-209ENST00000460573 APOBEC4Q8WW27 367 aaKnown RBP21.09■□□□□ 0.97
C9orf3-209ENST00000460573 C19orf60Q96EN9 201 aa21.09■□□□□ 0.97
C9orf3-209ENST00000460573 MAGEB18Q96M61 343 aa21.09■□□□□ 0.97
C9orf3-209ENST00000460573 C7orf26Q96N11 449 aa21.09■□□□□ 0.97
C9orf3-209ENST00000460573 FAIM2Q9BWQ8 316 aa21.09■□□□□ 0.97
C9orf3-209ENST00000460573 PNPOQ9NVS9 261 aa21.09■□□□□ 0.97
C9orf3-209ENST00000460573 GCN1Q92616 2671 aaKnown RBP21.09■□□□□ 0.97
C9orf3-209ENST00000460573 ZNF462Q96JM2 2506 aa21.08■□□□□ 0.97
C9orf3-209ENST00000460573 TCRBV16S1A1N1A0A5B0 115 aa21.08■□□□□ 0.97
C9orf3-209ENST00000460573 C1orf226A1L170 272 aa21.08■□□□□ 0.97
C9orf3-209ENST00000460573 OR2W5A6NFC9 320 aa21.08■□□□□ 0.97
C9orf3-209ENST00000460573 HPP00738 406 aa21.08■□□□□ 0.97
C9orf3-209ENST00000460573 ANXA4P09525 319 aaPredicted RBP21.08■□□□□ 0.97
C9orf3-209ENST00000460573 HNRNPFP52597 415 aaKnown RBP21.08■□□□□ 0.97
C9orf3-209ENST00000460573 SERTAD2Q14140 314 aa21.08■□□□□ 0.97
C9orf3-209ENST00000460573 C18orf63Q68DL7 685 aa21.08■□□□□ 0.97
C9orf3-209ENST00000460573 NOXRED1Q6NXP6 359 aa21.08■□□□□ 0.97
C9orf3-209ENST00000460573 CRLF3Q8IUI8 442 aa21.08■□□□□ 0.97
C9orf3-209ENST00000460573 TSLPQ969D9 159 aa21.08■□□□□ 0.97
C9orf3-209ENST00000460573 TM4SF18Q96CE8 201 aa21.08■□□□□ 0.97
C9orf3-209ENST00000460573 TUBB6Q9BUF5 446 aa21.08■□□□□ 0.97
C9orf3-209ENST00000460573 ZNF700Q9H0M5 742 aa21.08■□□□□ 0.97
C9orf3-209ENST00000460573 VTI1BQ9UEU0 232 aa21.08■□□□□ 0.97
C9orf3-209ENST00000460573 KCNMB2Q9Y691 235 aa21.08■□□□□ 0.97
C9orf3-209ENST00000460573 PYCARD-AS1I3L0S3 204 aa21.07■□□□□ 0.96
C9orf3-209ENST00000460573 VPS4BO75351 444 aa21.07■□□□□ 0.96
C9orf3-209ENST00000460573 AIFM1O95831 613 aa21.07■□□□□ 0.96
C9orf3-209ENST00000460573 MAOAP21397 527 aa21.07■□□□□ 0.96
C9orf3-209ENST00000460573 MAPK1P28482 360 aa21.07■□□□□ 0.96
C9orf3-209ENST00000460573 ZNF763Q0D2J5 394 aa21.07■□□□□ 0.96
C9orf3-209ENST00000460573 STX4Q12846 297 aa21.07■□□□□ 0.96
C9orf3-209ENST00000460573 PDCD2Q16342 344 aaPredicted RBP21.07■□□□□ 0.96
C9orf3-209ENST00000460573 SMU1Q2TAY7 513 aa21.07■□□□□ 0.96
C9orf3-209ENST00000460573 ATP6AP1LQ52LC2 224 aa21.07■□□□□ 0.96
C9orf3-209ENST00000460573 DCAF10Q5QP82 559 aa21.07■□□□□ 0.96
C9orf3-209ENST00000460573 NDUFAF5Q5TEU4 345 aa21.07■□□□□ 0.96
C9orf3-209ENST00000460573 OR52E8Q6IFG1 317 aa21.07■□□□□ 0.96
C9orf3-209ENST00000460573 RGS9BPQ6ZS82 235 aa21.07■□□□□ 0.96
C9orf3-209ENST00000460573 LRRC34Q8IZ02 419 aa21.07■□□□□ 0.96
C9orf3-209ENST00000460573 PIWIL2Q8TC59 973 aaKnown RBP21.07■□□□□ 0.96
C9orf3-209ENST00000460573 C8orf44Q96CB5 159 aa21.07■□□□□ 0.96
C9orf3-209ENST00000460573 FCRL1Q96LA6 429 aa21.07■□□□□ 0.96
C9orf3-209ENST00000460573 NECTIN3Q9NQS3 549 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms