RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 IDUAP35475 653 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 RFC3P40938 356 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 OR1D4P47884 311 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 PAPOLAP51003 745 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 EFNA3P52797 238 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 PRKAA2P54646 552 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 VSX2P58304 361 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 RPS7P62081 194 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 IL10RBQ08334 325 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 CETN1Q12798 172 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 CUL4BQ13620 913 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 E2F2Q14209 437 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 TAZQ16635 292 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 CDO1Q16878 200 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 BTBD16Q32M84 506 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 PTPN20Q4JDL3 420 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 FBLN7Q53RD9 439 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 RBM20Q5T481 1227 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 ICE2Q659A1 982 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 PDPK2PQ6A1A2 396 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 ACAD10Q6JQN1 1059 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 H3F3CQ6NXT2 135 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 FIGLAQ6QHK4 219 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 SPESP1Q6UW49 350 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 RRAGAQ7L523 313 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 STRADAQ7RTN6 431 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 MAATS1Q7Z4T9 603 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 CRLF3Q8IUI8 442 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 GSPT2Q8IYD1 628 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 SPARTQ8N0X7 666 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 BBS5Q8N3I7 341 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 TMEM132CQ8N3T6 1108 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 WDTC1Q8N5D0 677 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 SLC5A8Q8N695 610 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 METTL27Q8N6F8 245 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 TTC29Q8NA56 475 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 C16orf52Q8NHV5 167 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 Q8TCH9 128 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 ABHD5Q8WTS1 349 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 ZFAND2BQ8WV99 257 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 CELF6Q96J87 481 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 IMMP1LQ96LU5 166 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 TTC25Q96NG3 672 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 WWC2-AS2Q96NR7 200 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 SMC6Q96SB8 1091 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 VPS16Q9H269 839 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 LRRC19Q9H756 370 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 KCNK13Q9HB14 408 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 NOD2Q9HC29 1040 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 ZNF304Q9HCX3 659 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 TRIM36Q9NQ86 728 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 PSD3Q9NYI0 1048 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 EURLQ9NYK6 297 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 ZNF629Q9UEG4 869 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 NDRG3Q9UGV2 375 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 FBXO9Q9UK97 447 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 RIMKLBQ9ULI2 386 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 NFU1Q9UMS0 254 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 C19orf53Q9UNZ5 99 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 CNTN6Q9UQ52 1028 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 HEBP2Q9Y5Z4 205 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 SCINQ9Y6U3 715 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 MAU2Q9Y6X3 613 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 NOTCH3Q9UM47 2321 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 BIRC6Q9NR09 4857 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 HMX3A6NHT5 357 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 KDM4EB2RXH2 506 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 EEF1E1-BLOC1S5C9J1V9 151 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 J3KTA2 159 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 DFFAO00273 331 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 BTN3A3O00478 584 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 CETN3O15182 167 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 CTIFO43310 598 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 EEF1E1O43324 174 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 LMX1BO60663 402 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 POP7O75817 140 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 MT-CYBP00156 380 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 POLBP06746 335 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 HEXBP07686 556 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 PDHA1P08559 390 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 TMIGD3P0DMS9 266 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 RBL1P28749 1068 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 RFC1P35251 1148 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 PTPN9P43378 593 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 FMO5P49326 533 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 CYB561P49447 251 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 TAS2R50P59544 299 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 SLC10A7Q0GE19 358 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 NFE2L1Q14494 772 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 ZIC1Q15915 447 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 TMEM249Q2WGJ8 235 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 BEAN1Q3B7T3 259 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 ANKRD20A8PQ5CZ79 823 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 TCTE1Q5JU00 501 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 WLSQ5T9L3 541 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 ATPAF1Q5TC12 328 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 ALS2CLQ60I27 953 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 RGS7BPQ6MZT1 257 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 TRNP1Q6NT89 227 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 PRMT9Q6P2P2 845 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms