RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 KDM4EB2RXH2 506 aaPredicted RBP12.18□□□□□ -0.46
SRRT-206ENST00000460194 PGRMC1O00264 195 aaKnown RBP12.18□□□□□ -0.46
SRRT-206ENST00000460194 HCN1O60741 890 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 LDB3O75112 727 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 WDR47O94967 919 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 SAT1P21673 171 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 MAN2A2P49641 1150 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 MTTPP55157 894 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 ADAM8P78325 824 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 FOXD4Q12950 439 aaPredicted RBP12.18□□□□□ -0.46
SRRT-206ENST00000460194 SLC10A1Q14973 349 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 EFTUD2Q15029 972 aaKnown RBP eCLIP12.18□□□□□ -0.461e-9■■■■□ 24.3
SRRT-206ENST00000460194 TSNQ15631 228 aaKnown RBP12.18□□□□□ -0.46
SRRT-206ENST00000460194 FBXL19-AS1Q494R0 122 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 HP1BP3Q5SSJ5 553 aaPredicted RBP12.18□□□□□ -0.46
SRRT-206ENST00000460194 C1orf185Q5T7R7 199 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 FAM47EQ6ZV65 393 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 LRRC8AQ8IWT6 810 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 LRRC25Q8N386 305 aaPredicted RBP12.18□□□□□ -0.46
SRRT-206ENST00000460194 NKAPQ8N5F7 415 aaKnown RBP12.18□□□□□ -0.46
SRRT-206ENST00000460194 NAXEQ8NCW5 288 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 MYRIPQ8NFW9 859 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 SLC2A12Q8TD20 617 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 PAQR8Q8TEZ7 354 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 SREK1Q8WXA9 508 aaKnown RBP12.18□□□□□ -0.46
SRRT-206ENST00000460194 ALPK1Q96QP1 1244 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 POLDIP3Q9BY77 421 aaKnown RBP12.18□□□□□ -0.46
SRRT-206ENST00000460194 OR8D2Q9GZM6 311 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 ZNF703Q9H7S9 590 aaPredicted RBP12.18□□□□□ -0.46
SRRT-206ENST00000460194 LYRM4Q9HD34 91 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 ACKR4Q9NPB9 350 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 TRMT1Q9NXH9 659 aaKnown RBP12.18□□□□□ -0.46
SRRT-206ENST00000460194 MOCS1Q9NZB8 636 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 GPRC5BQ9NZH0 403 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 CRIM1Q9NZV1 1036 aa12.18□□□□□ -0.46
SRRT-206ENST00000460194 MRPS33Q9Y291 106 aaKnown RBP12.18□□□□□ -0.46
SRRT-206ENST00000460194 ATP6AP2A0A1C7CYW4 349 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 C17orf105B2RV13 164 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 ATP6AP2O75787 350 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 FAM155BO75949 473 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 SCELO95171 688 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 IFNA16P05015 189 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 FOSL1P15407 271 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 CEACAM8P31997 349 aaPredicted RBP12.17□□□□□ -0.46
SRRT-206ENST00000460194 PIGAP37287 484 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 CBLBQ13191 982 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 TGFBIQ15582 683 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 CEBPEQ15744 281 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 TRIM40Q6P9F5 258 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 OPN5Q6U736 354 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 DGAT2L6Q6ZPD8 337 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 C9orf40Q8IXQ3 194 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 CHDHQ8NE62 594 aaPredicted RBP12.17□□□□□ -0.46
SRRT-206ENST00000460194 NUBPLQ8TB37 319 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 GRK7Q8WTQ7 553 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 SARAFQ96BY9 339 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 MBD6Q96DN6 1003 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 CAPZA3Q96KX2 299 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 F2RL3Q96RI0 385 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 MAPKAP1Q9BPZ7 522 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 CLEC4MQ9H2X3 399 aaPredicted RBP12.17□□□□□ -0.46
SRRT-206ENST00000460194 ACAD8Q9UKU7 415 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 PPP2R2CQ9Y2T4 447 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 CHCHD2Q9Y6H1 151 aaPredicted RBP12.17□□□□□ -0.46
SRRT-206ENST00000460194 MED12Q93074 2177 aa12.17□□□□□ -0.46
SRRT-206ENST00000460194 A0A088AWK7 358 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 TRGV5A0A0B4J1U4 118 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 FAM95CA0A1B0GW59 222 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 PABPN1LA6NDY0 278 aaKnown RBP12.16□□□□□ -0.46
SRRT-206ENST00000460194 HRKO00198 91 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 H2AFYO75367 372 aaKnown RBP12.16□□□□□ -0.46
SRRT-206ENST00000460194 GABRA1P14867 456 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 ZNF10P21506 573 aaPredicted RBP12.16□□□□□ -0.46
SRRT-206ENST00000460194 CASP2P42575 452 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 ASPHQ12797 758 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 SERTAD2Q14140 314 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 DOC2AQ14183 400 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 DAZAP2Q15038 168 aaPredicted RBP12.16□□□□□ -0.46
SRRT-206ENST00000460194 WLSQ5T9L3 541 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 ADAMTSL2Q86TH1 951 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 CDC20BQ86Y33 519 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 ULK2Q8IYT8 1036 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 KRT78Q8N1N4 520 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 ACOT4Q8N9L9 421 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 OR5L2Q8NGL0 311 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 ZNF473Q8WTR7 871 aaKnown RBP12.16□□□□□ -0.46
SRRT-206ENST00000460194 KIAA1191Q96A73 305 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 ESAMQ96AP7 390 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 NTNG2Q96CW9 530 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 SENP5Q96HI0 755 aaPredicted RBP12.16□□□□□ -0.46
SRRT-206ENST00000460194 OSBPL9Q96SU4 736 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 NAP1L3Q99457 506 aaPredicted RBP12.16□□□□□ -0.46
SRRT-206ENST00000460194 EGFL8Q99944 293 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 POPDC3Q9HBV1 291 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 QPCTLQ9NXS2 382 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 B4GALT7Q9UBV7 327 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 CBLCQ9ULV8 474 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 CHMP2BQ9UQN3 213 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 PLEKHA6Q9Y2H5 1048 aa12.16□□□□□ -0.46
SRRT-206ENST00000460194 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms