RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ADAM15Q13444 863 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 NUP43Q8NFH3 380 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 PROKR2Q8NFJ6 384 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 ISL2Q96A47 359 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 LHPPQ9H008 270 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 RNF38Q9H0F5 515 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 MVB12BQ9H7P6 319 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 MBD2Q9UBB5 411 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 ZNF879B4DU55 563 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 PFKLP17858 780 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 CST5P28325 142 aaPredicted RBP14.14□□□□□ -0.15
PTPRU-205ENST00000460170 HOXD9P28356 352 aaPredicted RBP14.14□□□□□ -0.15
PTPRU-205ENST00000460170 RGNQ15493 299 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 EOGTQ5NDL2 527 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 OLFML2AQ68BL7 652 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 NADSYN1Q6IA69 706 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 SLC25A24Q6NUK1 477 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 NAGSQ8N159 534 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 SLC5A8Q8N695 610 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 TEX26Q8N6G2 289 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 SLC25A36Q96CQ1 311 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 ACPTQ9BZG2 426 aa14.14□□□□□ -0.15
PTPRU-205ENST00000460170 FEZF1A0PJY2 475 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 SMIM30A4D0T7 59 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 A8MUA0 341 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 OXSR1O95747 527 aaPredicted RBP14.13□□□□□ -0.15
PTPRU-205ENST00000460170 CELP19835 753 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 HNRNPA0Q13151 305 aaKnown RBP14.13□□□□□ -0.15
PTPRU-205ENST00000460170 SPHARQ15513 63 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 PRSS48Q7RTY5 328 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 SLITRK4Q8IW52 837 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 SLC39A11Q8N1S5 342 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 AVL9Q8NBF6 648 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 SUN3Q8TAQ9 357 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.13□□□□□ -0.15
PTPRU-205ENST00000460170 TIGARQ9NQ88 270 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 KAT7O95251 611 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 PEPDP12955 493 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 ATF6P18850 670 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 HOXC13P31276 330 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 SLC6A6P31641 620 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 MLLT3P42568 568 aaPredicted RBP14.13□□□□□ -0.15
PTPRU-205ENST00000460170 VEZF1Q14119 521 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 AMZ1Q400G9 498 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 TMEM35AQ53FP2 167 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 CTSL3PQ5NE16 218 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 LIPKQ5VXJ0 399 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 CES4AQ5XG92 561 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 TOMM5Q8N4H5 51 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 ISG20Q96AZ6 181 aaKnown RBP14.13□□□□□ -0.15
PTPRU-205ENST00000460170 CLSTN3Q9BQT9 956 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 LINC00597Q9H2U6 94 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 GORASP2Q9H8Y8 452 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 BRF2Q9HAW0 419 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 HEPACAM2A8MVW5 462 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 ASPGQ86U10 573 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 PGBD5Q8N414 524 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 CPXM2Q8N436 756 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 OR51G2Q8NGK0 314 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 SMARCD2Q92925 531 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 FAM83CQ9BQN1 747 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 ACTL8Q9H568 366 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 ENPP4Q9Y6X5 453 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 BCORQ6W2J9 1755 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 MYO9BQ13459 2157 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 ZNF860A6NHJ4 632 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 ANHXE9PGG2 379 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 MUSKO15146 869 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 MT-ND5P03915 603 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 DCKP27707 260 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 CTSOP43234 321 aaPredicted RBP14.13□□□□□ -0.15
PTPRU-205ENST00000460170 ZXDBP98169 803 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 RETREG3Q86VR2 466 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 TMEM19Q96HH6 336 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 MTG2Q9H4K7 406 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 BRD7Q9NPI1 651 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 STOML2Q9UJZ1 356 aa14.13□□□□□ -0.15
PTPRU-205ENST00000460170 A0A075B6Q4 140 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 A0A1W2PQ72 361 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 SCDO00767 359 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 VIPR2P41587 438 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 MLLT10P55197 1068 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 TAS2R43P59537 309 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 DSC1Q08554 894 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 PUM1Q14671 1186 aaKnown RBP eCLIP14.12□□□□□ -0.15
PTPRU-205ENST00000460170 ZNF551Q7Z340 670 aaPredicted RBP14.12□□□□□ -0.15
PTPRU-205ENST00000460170 TRMT2BQ96GJ1 504 aaKnown RBP14.12□□□□□ -0.15
PTPRU-205ENST00000460170 ADAD1Q96M93 576 aaKnown RBP14.12□□□□□ -0.15
PTPRU-205ENST00000460170 MKL2Q9ULH7 1088 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 PRSS21Q9Y6M0 314 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 ARAP2Q8WZ64 1704 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 A0A1W2PQU0 124 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 ADAM12O43184 909 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 PROM1O43490 865 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 NUAK1O60285 661 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 GPR37L1O60883 481 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 CCKBRP32239 447 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 CCR7P32248 378 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 HTR3DQ70Z44 454 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 RELTQ969Z4 430 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms