RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 RPE65Q16518 533 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 PAGE2BQ5JRK9 111 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 REP15Q6BDI9 236 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 MED27Q6P2C8 311 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 LCTLQ6UWM7 567 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 C17orf64Q86WR6 236 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 ULK2Q8IYT8 1036 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 GJD3Q8N144 294 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 RNF175Q8N4F7 328 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 WDR20Q8TBZ3 569 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 SETD7Q8WTS6 366 aaKnown RBP9.91□□□□□ -0.82
HERC4-207ENST00000460168 SMPDL3AQ92484 453 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 TANKQ92844 425 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 CLDN23Q96B33 292 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 PHF21AQ96BD5 680 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 REPS1Q96D71 796 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 CAMK1GQ96NX5 476 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 MENTQ9BUN1 341 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 EFCAB11Q9BUY7 163 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 RAB11FIP5Q9BXF6 653 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 HEBP2Q9Y5Z4 205 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 COLEC10Q9Y6Z7 277 aa9.91□□□□□ -0.82
HERC4-207ENST00000460168 GON4LQ3T8J9 2241 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 A0A1W2PQ72 361 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 ZNF701M0R085 212 aaPredicted RBP9.9□□□□□ -0.82
HERC4-207ENST00000460168 MRASO14807 208 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 CFLARO15519 480 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 SLITRK5O94991 958 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 TNFP01375 233 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 S100A9P06702 114 aaKnown RBP9.9□□□□□ -0.82
HERC4-207ENST00000460168 C1GALT1C1LP0DN25 315 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 CDH1P12830 882 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 ATP6V1B1P15313 513 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 RPS9P46781 194 aaKnown RBP9.9□□□□□ -0.82
HERC4-207ENST00000460168 ERFP50548 548 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 RAB28P51157 221 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 UFM1P61960 85 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 RPL6Q02878 288 aaKnown RBP9.9□□□□□ -0.82
HERC4-207ENST00000460168 APOFQ13790 326 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 SLBPQ14493 270 aaKnown RBP eCLIP9.9□□□□□ -0.82
HERC4-207ENST00000460168 HIST2H2ACQ16777 129 aaPredicted RBP9.9□□□□□ -0.82
HERC4-207ENST00000460168 VPS26BQ4G0F5 336 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 ATG9BQ674R7 924 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 HIST2H2AA3Q6FI13 130 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 SLC16A12Q6ZSM3 486 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 ZFAND4Q86XD8 727 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 OR7G3Q8NG95 312 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 IFI44Q8TCB0 444 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 UTP15Q8TED0 518 aaKnown RBP9.9□□□□□ -0.82
HERC4-207ENST00000460168 AKAP1Q92667 903 aaKnown RBP eCLIP9.9□□□□□ -0.82
HERC4-207ENST00000460168 AHCYL2Q96HN2 611 aaKnown RBP9.9□□□□□ -0.82
HERC4-207ENST00000460168 TXNDC15Q96J42 360 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 SLC45A3Q96JT2 553 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 TEX37Q96LM6 180 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 SLC6A18Q96N87 628 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 ZNF700Q9H0M5 742 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 PCBD2Q9H0N5 130 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 WDR41Q9HAD4 459 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 ZIM2Q9NZV7 527 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 NDUFAF1Q9Y375 327 aa9.9□□□□□ -0.82
HERC4-207ENST00000460168 SPTY2D1-AS1A0A0U1RR47 76 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 PIPSLA2A3N6 862 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 BBIP1A8MTZ0 92 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 CIB2O75838 187 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 SEMA3DO95025 777 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 MAOBP27338 520 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 PSMB5P28074 263 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 CXCL12P48061 93 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 MRPL19P49406 292 aaKnown RBP9.9□□□□□ -0.83
HERC4-207ENST00000460168 HOXA1P49639 335 aaPredicted RBP9.9□□□□□ -0.83
HERC4-207ENST00000460168 TSPAN5P62079 268 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 MEF2AQ02078 507 aaPredicted RBP9.9□□□□□ -0.83
HERC4-207ENST00000460168 RCAN2Q14206 197 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 PTGR1Q14914 329 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 MZT2BQ6NZ67 158 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 BLOC1S3Q6QNY0 202 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 NXPE4Q6UWF7 544 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 ARSKQ6UWY0 536 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 PDSS2Q86YH6 399 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 PGAM4Q8N0Y7 254 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 LINC01555Q8NAE3 123 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 ICA1LQ8NDH6 482 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 SRFBP1Q8NEF9 429 aaKnown RBP9.9□□□□□ -0.83
HERC4-207ENST00000460168 OR52E1Q8NGJ3 308 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 OR5H6Q8NGV6 325 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 PROKR1Q8TCW9 393 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 KLHDC7BQ96G42 594 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 FRMD6Q96NE9 622 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 BCL7BQ9BQE9 202 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 TINAGL1Q9GZM7 467 aaPredicted RBP9.9□□□□□ -0.83
HERC4-207ENST00000460168 XKR8Q9H6D3 395 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 ZNF696Q9H7X3 374 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 RMND5AQ9H871 391 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 BRD7Q9NPI1 651 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 VPS29Q9UBQ0 182 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 MAN2B2Q9Y2E5 1009 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 DGKBQ9Y6T7 804 aa9.9□□□□□ -0.83
HERC4-207ENST00000460168 PRAMEF33A0A0G2JMD5 474 aa9.89□□□□□ -0.83
HERC4-207ENST00000460168 CCDC154A6NI56 674 aa9.89□□□□□ -0.83
HERC4-207ENST00000460168 MAGEB17A8MXT2 336 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms