RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 MRM1Q6IN84 353 aaKnown RBP19.38■□□□□ 0.69
VARS-218ENST00000459667 TRABD2AQ86V40 505 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 SRRM1Q8IYB3 904 aaKnown RBP19.38■□□□□ 0.69
VARS-218ENST00000459667 B3GNT7Q8NFL0 401 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 OR1N1Q8NGS0 311 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 APOPT1Q96IL0 206 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 SMC6Q96SB8 1091 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 NPAS2Q99743 824 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 MRPL1Q9BYD6 325 aaKnown RBP19.38■□□□□ 0.69
VARS-218ENST00000459667 SLC29A3Q9BZD2 475 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.38■□□□□ 0.69
VARS-218ENST00000459667 GSTO2Q9H4Y5 243 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 CLMPQ9H6B4 373 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 RPF2Q9H7B2 306 aaKnown RBP19.38■□□□□ 0.69
VARS-218ENST00000459667 BRF2Q9HAW0 419 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 MKS1Q9NXB0 559 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 AHSPQ9NZD4 102 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 SLC12A4Q9UP95 1085 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 ATG4BQ9Y4P1 393 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 NBASA2RRP1 2371 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 TRAV17A0A0B4J275 112 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 CCDC151A5D8V7 595 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 MANBAO00462 879 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 FGF17O60258 216 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 VPS4BO75351 444 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 KRT6AP02538 564 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 GBAP04062 536 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 KRT6BP04259 564 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 FAM58BPP0C7Q3 252 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 CPA3P15088 417 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 HMOX2P30519 316 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 KRT6CP48668 564 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 CLCN2P51788 898 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 PKNOX1P55347 436 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 ID2Q02363 134 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 TCHHL1Q5QJ38 904 aaPredicted RBP19.37■□□□□ 0.69
VARS-218ENST00000459667 C18orf63Q68DL7 685 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 LGI4Q8N135 537 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 TMEM132CQ8N3T6 1108 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 APCDD1LQ8NCL9 501 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 METTL6Q8TCB7 284 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 ANKRD9Q96BM1 317 aaPredicted RBP19.37■□□□□ 0.69
VARS-218ENST00000459667 C19orf60Q96EN9 201 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 HBEGFQ99075 208 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 ASF1BQ9NVP2 202 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 SENP1Q9P0U3 644 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 VTI1BQ9UEU0 232 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 VPS4AQ9UN37 437 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 PPIEQ9UNP9 301 aaKnown RBP19.37■□□□□ 0.69
VARS-218ENST00000459667 ASB4Q9Y574 426 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 COPG1Q9Y678 874 aaKnown RBP19.37■□□□□ 0.69
VARS-218ENST00000459667 CLCA3PQ9Y6N3 262 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 SHANK1Q9Y566 2161 aa19.37■□□□□ 0.69
VARS-218ENST00000459667 TRBV11-1A0A0K0K1C0 115 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 RGS16O15492 202 aaPredicted RBP19.36■□□□□ 0.69
VARS-218ENST00000459667 PROM1O43490 865 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 MAN1A2O60476 641 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 PRKRAO75569 313 aaKnown RBP19.36■□□□□ 0.69
VARS-218ENST00000459667 ENO1P06733 434 aaKnown RBP19.36■□□□□ 0.69
VARS-218ENST00000459667 NR2F6P10588 404 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 DNAJB13P59910 316 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 ZNF844Q08AG5 666 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 PAGE2Q7Z2X7 111 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 RPS19BP1Q86WX3 136 aaKnown RBP19.36■□□□□ 0.69
VARS-218ENST00000459667 OR4N5Q8IXE1 308 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 METTL4Q8N3J2 472 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 C7orf57Q8NEG2 295 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 SUN3Q8TAQ9 357 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 AGAP11Q8TF27 550 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 TANKQ92844 425 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 DAZLQ92904 295 aaKnown RBP19.36■□□□□ 0.69
VARS-218ENST00000459667 NCLNQ969V3 563 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 VMP1Q96GC9 406 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 DEFB126Q9BYW3 111 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 CDCP1Q9H5V8 836 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 WDR41Q9HAD4 459 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 MID1IP1Q9NPA3 183 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 ADAM29Q9UKF5 820 aa19.36■□□□□ 0.69
VARS-218ENST00000459667 ARHGAP10A1A4S6 786 aa19.35■□□□□ 0.69
VARS-218ENST00000459667 GABRR3A8MPY1 467 aa19.35■□□□□ 0.69
VARS-218ENST00000459667 ESRRBO95718 433 aa19.35■□□□□ 0.69
VARS-218ENST00000459667 AIFM1O95831 613 aa19.35■□□□□ 0.69
VARS-218ENST00000459667 KLK1P06870 262 aa19.35■□□□□ 0.69
VARS-218ENST00000459667 TNNI3P19429 210 aa19.35■□□□□ 0.69
VARS-218ENST00000459667 TPP2P29144 1249 aaPredicted RBP19.35■□□□□ 0.69
VARS-218ENST00000459667 NAGLUP54802 743 aa19.35■□□□□ 0.69
VARS-218ENST00000459667 IGLV3-21P80748 117 aaPredicted RBP19.35■□□□□ 0.69
VARS-218ENST00000459667 CFAP157Q5JU67 520 aa19.35■□□□□ 0.69
VARS-218ENST00000459667 COMMD6Q7Z4G1 85 aa19.35■□□□□ 0.69
VARS-218ENST00000459667 BANPQ8N9N5 519 aa19.35■□□□□ 0.69
VARS-218ENST00000459667 GALNT11Q8NCW6 608 aa19.35■□□□□ 0.69
VARS-218ENST00000459667 OR14A16Q8NHC5 309 aa19.35■□□□□ 0.69
VARS-218ENST00000459667 PTPMT1Q8WUK0 201 aaPredicted RBP19.35■□□□□ 0.69
VARS-218ENST00000459667 UTP23Q9BRU9 249 aaKnown RBP19.35■□□□□ 0.69
VARS-218ENST00000459667 OXSMQ9NWU1 459 aa19.35■□□□□ 0.69
VARS-218ENST00000459667 NMRK1Q9NWW6 199 aa19.35■□□□□ 0.69
VARS-218ENST00000459667 NTNG1Q9Y2I2 539 aa19.35■□□□□ 0.69
VARS-218ENST00000459667 PLLPQ9Y342 182 aa19.35■□□□□ 0.69
VARS-218ENST00000459667 A0A1W2PR48 441 aa19.34■□□□□ 0.69
VARS-218ENST00000459667 C17orf105B2RV13 164 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms