RNA–Protein interactions for RNA: ENST00000458642.5

HDAC11-216, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-216ENST00000458642 OR14A16Q8NHC5 309 aa17.13■□□□□ 0.33
HDAC11-216ENST00000458642 ZNF721Q8TF20 911 aa17.13■□□□□ 0.33
HDAC11-216ENST00000458642 ANKRD9Q96BM1 317 aaPredicted RBP17.13■□□□□ 0.33
HDAC11-216ENST00000458642 VPS39Q96JC1 886 aa17.13■□□□□ 0.33
HDAC11-216ENST00000458642 TMUB1Q9BVT8 246 aa17.13■□□□□ 0.33
HDAC11-216ENST00000458642 CCM2LQ9NUG4 571 aaPredicted RBP17.13■□□□□ 0.33
HDAC11-216ENST00000458642 DNAJC11Q9NVH1 559 aa17.13■□□□□ 0.33
HDAC11-216ENST00000458642 ZNF358Q9NW07 568 aa17.13■□□□□ 0.33
HDAC11-216ENST00000458642 ALKBH4Q9NXW9 302 aa17.13■□□□□ 0.33
HDAC11-216ENST00000458642 MOCS1Q9NZB8 636 aa17.13■□□□□ 0.33
HDAC11-216ENST00000458642 WWOXQ9NZC7 414 aa17.13■□□□□ 0.33
HDAC11-216ENST00000458642 ATG4BQ9Y4P1 393 aa17.13■□□□□ 0.33
HDAC11-216ENST00000458642 A0A088AWK7 358 aa17.12■□□□□ 0.33
HDAC11-216ENST00000458642 KDM4EB2RXH2 506 aaPredicted RBP17.12■□□□□ 0.33
HDAC11-216ENST00000458642 AQP7O14520 342 aa17.12■□□□□ 0.33
HDAC11-216ENST00000458642 PHGDHO43175 533 aaKnown RBP17.12■□□□□ 0.33
HDAC11-216ENST00000458642 RFPL3SP0C7P2 107 aa17.12■□□□□ 0.33
HDAC11-216ENST00000458642 ZNF10P21506 573 aaPredicted RBP17.12■□□□□ 0.33
HDAC11-216ENST00000458642 MAN2A2P49641 1150 aa17.12■□□□□ 0.33
HDAC11-216ENST00000458642 CLYBLQ8N0X4 340 aa17.12■□□□□ 0.33
HDAC11-216ENST00000458642 RNF175Q8N4F7 328 aa17.12■□□□□ 0.33
HDAC11-216ENST00000458642 SNX31Q8N9S9 440 aa17.12■□□□□ 0.33
HDAC11-216ENST00000458642 GOLM1Q8NBJ4 401 aa17.12■□□□□ 0.33
HDAC11-216ENST00000458642 RUNDC3BQ96NL0 473 aa17.12■□□□□ 0.33
HDAC11-216ENST00000458642 SORBS1Q9BX66 1292 aaKnown RBP17.12■□□□□ 0.33
HDAC11-216ENST00000458642 SACM1LQ9NTJ5 587 aa17.12■□□□□ 0.33
HDAC11-216ENST00000458642 DNAJB12Q9NXW2 375 aaKnown RBP17.12■□□□□ 0.33
HDAC11-216ENST00000458642 GPRC5BQ9NZH0 403 aa17.12■□□□□ 0.33
HDAC11-216ENST00000458642 ACAD8Q9UKU7 415 aa17.12■□□□□ 0.33
HDAC11-216ENST00000458642 MTO1Q9Y2Z2 717 aaKnown RBP17.12■□□□□ 0.33
HDAC11-216ENST00000458642 DNHD1Q96M86 4753 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 SAP18O00422 153 aaKnown RBP17.11■□□□□ 0.33
HDAC11-216ENST00000458642 CLGNO14967 610 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 FGF17O60258 216 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 CTAG2O75638 210 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 LRATO95237 230 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 CD99P14209 185 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 ATP5A1P25705 553 aaKnown RBP17.11■□□□□ 0.33
HDAC11-216ENST00000458642 GSTM2P28161 218 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 WNT3P56703 355 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 PDIA2Q13087 525 aaKnown RBP17.11■□□□□ 0.33
HDAC11-216ENST00000458642 FRG1Q14331 258 aaKnown RBP17.11■□□□□ 0.33
HDAC11-216ENST00000458642 EFTUD2Q15029 972 aaKnown RBP eCLIP17.11■□□□□ 0.332e-6■■■□□ 15.5
HDAC11-216ENST00000458642 HYAL4Q2M3T9 481 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 KRTAP21-3Q3LHN1 58 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 C1orf185Q5T7R7 199 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 PRAMEF20Q5VT98 475 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 LYPD8Q6UX82 237 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 SEM1Q6ZVN7 128 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 WDR53Q7Z5U6 358 aaPredicted RBP17.11■□□□□ 0.33
HDAC11-216ENST00000458642 C9orf40Q8IXQ3 194 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 ACOT4Q8N9L9 421 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 PPWD1Q96BP3 646 aaKnown RBP17.11■□□□□ 0.33
HDAC11-216ENST00000458642 GPATCH1Q9BRR8 931 aaKnown RBP17.11■□□□□ 0.33
HDAC11-216ENST00000458642 MS4A8Q9BY19 250 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 TRIM31Q9BZY9 425 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 DERL2Q9GZP9 239 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 RHOJQ9H4E5 214 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 EHD1Q9H4M9 534 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 LDAHQ9H6V9 325 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 PROK2Q9HC23 129 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 SH2D2AQ9NP31 389 aa17.11■□□□□ 0.33
HDAC11-216ENST00000458642 ACANP16112 2415 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 NIPBLQ6KC79 2804 aaeCLIP17.1■□□□□ 0.33
HDAC11-216ENST00000458642 CXorf49A8MYA2 514 aaPredicted RBP17.1■□□□□ 0.33
HDAC11-216ENST00000458642 PRKRAO75569 313 aaKnown RBP17.1■□□□□ 0.33
HDAC11-216ENST00000458642 P04436 131 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 GGT5P36269 586 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 KCNC1P48547 511 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 ARL4CP56559 192 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 SLC10A1Q14973 349 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 PDK4Q16654 411 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 ZNF791Q3KP31 576 aaPredicted RBP17.1■□□□□ 0.33
HDAC11-216ENST00000458642 OPN5Q6U736 354 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 ARSKQ6UWY0 536 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 GPSM1Q86YR5 675 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 OR8K3Q8NH51 312 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 EXT2Q93063 718 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 LRRC39Q96DD0 335 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 WDR34Q96EX3 536 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 PTCD3Q96EY7 689 aaKnown RBP17.1■□□□□ 0.33
HDAC11-216ENST00000458642 SGCZQ96LD1 299 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 KCNC2Q96PR1 638 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 PITHD1Q9GZP4 211 aaPredicted RBP17.1■□□□□ 0.33
HDAC11-216ENST00000458642 CXXC4Q9H2H0 198 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 SLC6A15Q9H2J7 730 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 ZNF703Q9H7S9 590 aaPredicted RBP17.1■□□□□ 0.33
HDAC11-216ENST00000458642 LYRM4Q9HD34 91 aa17.1■□□□□ 0.33
HDAC11-216ENST00000458642 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.1■□□□□ 0.33
HDAC11-216ENST00000458642 TRGV5A0A0B4J1U4 118 aa17.09■□□□□ 0.33
HDAC11-216ENST00000458642 LRRC3CA6NJW4 275 aa17.09■□□□□ 0.33
HDAC11-216ENST00000458642 SUSD5O60279 629 aa17.09■□□□□ 0.33
HDAC11-216ENST00000458642 SEC31AO94979 1220 aaKnown RBP17.09■□□□□ 0.33
HDAC11-216ENST00000458642 CCDC166P0CW27 439 aa17.09■□□□□ 0.33
HDAC11-216ENST00000458642 CD1DP15813 335 aa17.09■□□□□ 0.33
HDAC11-216ENST00000458642 HOXB4P17483 251 aaPredicted RBP17.09■□□□□ 0.33
HDAC11-216ENST00000458642 MSH2P43246 934 aa17.09■□□□□ 0.33
HDAC11-216ENST00000458642 CHIT1Q13231 466 aa17.09■□□□□ 0.33
HDAC11-216ENST00000458642 CEBPEQ15744 281 aa17.09■□□□□ 0.33
HDAC11-216ENST00000458642 PIGGQ5H8A4 983 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms