RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 SAMD14Q8IZD0 417 aaPredicted RBP8.49□□□□□ -1.05
VPS50-207ENST00000458530 C19orf47Q8N9M1 422 aaKnown RBP8.49□□□□□ -1.05
VPS50-207ENST00000458530 BHLHE22Q8NFJ8 381 aaPredicted RBP8.49□□□□□ -1.05
VPS50-207ENST00000458530 OR4A15Q8NGL6 344 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.49□□□□□ -1.05
VPS50-207ENST00000458530 FAM120BQ96EK7 910 aaKnown RBP8.49□□□□□ -1.05
VPS50-207ENST00000458530 ZBED6CLQ96FA7 236 aaPredicted RBP8.49□□□□□ -1.05
VPS50-207ENST00000458530 TCTN2Q96GX1 697 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 PPM1MQ96MI6 270 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 NRTNQ99748 197 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 THUMPD3Q9BV44 507 aaKnown RBP8.49□□□□□ -1.05
VPS50-207ENST00000458530 CHRNA10Q9GZZ6 450 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 PAIP1Q9H074 479 aaKnown RBP8.49□□□□□ -1.05
VPS50-207ENST00000458530 MS4A12Q9NXJ0 267 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 ACTR3BQ9P1U1 418 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 STX18Q9P2W9 335 aaKnown RBP8.49□□□□□ -1.05
VPS50-207ENST00000458530 SNX11Q9Y5W9 270 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 CABIN1Q9Y6J0 2220 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 A0A0J9YVX5 310 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 A0A1B0GTQ1 180 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 C1orf226A1L170 272 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 GABRR3A8MPY1 467 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 FAM220BPB1ANY3 271 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 ACOT8O14734 319 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 PPM1DO15297 605 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 B3GALT2O43825 422 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 SDC3O75056 442 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 C8BP07358 591 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 FAM58BPP0C7Q3 252 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 LAMP1P11279 417 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 PIM1P11309 404 aaPredicted RBP8.48□□□□□ -1.05
VPS50-207ENST00000458530 SNRPBP14678 240 aaKnown RBP8.48□□□□□ -1.05
VPS50-207ENST00000458530 PNLIPP16233 465 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 TYRP1P17643 537 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 ATP5A1P25705 553 aaKnown RBP8.48□□□□□ -1.05
VPS50-207ENST00000458530 TLX1P31314 330 aaPredicted RBP8.48□□□□□ -1.05
VPS50-207ENST00000458530 BUD31P41223 144 aaPredicted RBP8.48□□□□□ -1.05
VPS50-207ENST00000458530 ALDH9A1P49189 494 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 GSK3BP49841 420 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 ABHD18Q0P651 414 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 CCNIQ14094 377 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 NDUFA9Q16795 377 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 INAVAQ3KP66 663 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 RUNDC3AQ59EK9 446 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 IRAK1BP1Q5VVH5 260 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 FCRL6Q6DN72 434 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 LCN8Q6JVE9 175 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 ZNF438Q7Z4V0 828 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 ANKRD46Q86W74 232 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 PTRH1Q86Y79 214 aaKnown RBP8.48□□□□□ -1.05
VPS50-207ENST00000458530 FAM20CQ8IXL6 584 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 RNF148Q8N7C7 305 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 ACOT4Q8N9L9 421 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 OR2T12Q8NG77 320 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 N4BP2L2Q92802 583 aaPredicted RBP8.48□□□□□ -1.05
VPS50-207ENST00000458530 TM4SF19Q96DZ7 209 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 SLC45A3Q96JT2 553 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 OR2A5Q96R48 311 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 SERINC2Q96SA4 455 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 CPPED1Q9BRF8 314 aaPredicted RBP8.48□□□□□ -1.05
VPS50-207ENST00000458530 ZNF717Q9BY31 904 aaPredicted RBP8.48□□□□□ -1.05
VPS50-207ENST00000458530 PRORYQ9H606 182 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 S100A14Q9HCY8 104 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 SERHLQ9NQF3 203 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 CMTM6Q9NX76 183 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 VAPAQ9P0L0 249 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 LRIT1Q9P2V4 623 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 PILRAQ9UKJ1 303 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 PSME2Q9UL46 239 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 ENTPD4Q9Y227 616 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 PCDHB14Q9Y5E9 798 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 GMEB1Q9Y692 573 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 UNC79Q9P2D8 2635 aa8.48□□□□□ -1.05
VPS50-207ENST00000458530 SCN3AQ9NY46 2000 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 TRBV5-3A0A0A0MS03 114 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 A0A1W2PRB8 838 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 EIF4E1BA6NMX2 242 aaKnown RBP8.47□□□□□ -1.05
VPS50-207ENST00000458530 H0Y3Z8 333 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 CLIC1O00299 241 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 RTCAO00442 366 aaKnown RBP8.47□□□□□ -1.05
VPS50-207ENST00000458530 SRPX2O60687 465 aaPredicted RBP8.47□□□□□ -1.05
VPS50-207ENST00000458530 KRT36O76013 467 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 ZBTB11O95625 1053 aaPredicted RBP8.47□□□□□ -1.05
VPS50-207ENST00000458530 CPSF4O95639 269 aaKnown RBP8.47□□□□□ -1.05
VPS50-207ENST00000458530 KRT75O95678 551 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 TBX6O95947 436 aaPredicted RBP8.47□□□□□ -1.05
VPS50-207ENST00000458530 GBAP04062 536 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 GPIP06744 558 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 ZNF888P0CJ79 500 aaPredicted RBP8.47□□□□□ -1.05
VPS50-207ENST00000458530 NR2F6P10588 404 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 UMPSP11172 480 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 PSMA4P25789 261 aaKnown RBP8.47□□□□□ -1.05
VPS50-207ENST00000458530 MAGEA8P43361 318 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 ARL4DP49703 201 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 ANXA11P50995 505 aaKnown RBP8.47□□□□□ -1.05
VPS50-207ENST00000458530 MTPNP58546 118 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 PLIN5Q00G26 463 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 BNC1Q01954 994 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 RHDQ02161 417 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 SLC34A1Q06495 639 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms